Protein: ENSP00000373364
Gene: GOLM1

LinkedOmicsKB © 2022-2023 Zhang Lab

GOLM1:
golgi membrane protein 1

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S187KGNEAVASRDLSENN101365112-10380847798-8748938494854910105449418
S191AVASRDLSENNDQRQ1097617-9068261936-9956989043427616100424315
S204RQQLQALSEPQPRLQ485------------44152137364
S231KGNVLGNSKSQTPAP737833-1615--71-4123--1412--90391212
S233NVLGNSKSQTPAPSS188-------------------
T235LGNSKSQTPAPSSEV188-------------------
S240SQTPAPSSEVVLDSK123------------------1112
T255RQVEKEETNEIQVVN10137262-10380434699-10862103941101018118105449518
T299GAGELGQTPQVQAAL18--44----------------
S307PQVQAALSVSQENPE844370-4427--9-542854502523--2814512
Showing 1 to 10 of 14 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S187KGNEAVASRDLSENN-0.49--2.4e-102.7e-3-1.8e-3-0.0041.3e-5-0.64-0.37-0.065
S191AVASRDLSENNDQRQ-2.1e-5--4.5e-180.11-0.24-3.8e-30.02-0.19-1.6e-3-0.28
S204RQQLQALSEPQPRLQ-----------
S231KGNVLGNSKSQTPAP-0.4-----0.16---0.83-
S233NVLGNSKSQTPAPSS-----------
T235LGNSKSQTPAPSSEV-----------
S240SQTPAPSSEVVLDSK-----------
T255RQVEKEETNEIQVVN-0.83--3e-195.0e-4-2.9e-3-5.1e-59.6e-80.130.032-9.7e-3
T299GAGELGQTPQVQAAL-----------
S307PQVQAALSVSQENPE0.74--0.97---0.016-0.930.038-0.23-
Showing 1 to 10 of 14 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS187S191S204S231S233T235S240T255T299S307S309Y351S360T362proteinRNASCNVmethylationCCRCCS187S191S204S231S233T235S240T255T299S307S309Y351S360T362proteinRNASCNVmethylationCOADS187S191S204S231S233T235S240T255T299S307S309Y351S360T362proteinRNASCNVmethylationGBMS187S191S204S231S233T235S240T255T299S307S309Y351S360T362proteinRNASCNVmethylationHNSCCS187S191S204S231S233T235S240T255T299S307S309Y351S360T362proteinRNASCNVmethylationLSCCS187S191S204S231S233T235S240T255T299S307S309Y351S360T362proteinRNASCNVmethylationLUADS187S191S204S231S233T235S240T255T299S307S309Y351S360T362proteinRNASCNVmethylationOVS187S191S204S231S233T235S240T255T299S307S309Y351S360T362proteinRNASCNVmethylationPDACS187S191S204S231S233T235S240T255T299S307S309Y351S360T362proteinRNASCNVmethylationUCECS187S191S204S231S233T235S240T255T299S307S309Y351S360T362proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.