Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S7 _MSFTTRS TFSTNYR 8 693 9 - - - 97 100 - - 52 30 44 42 9 8 76 17 69 27 95 18 T8 MSFTTRST FSTNYRS 2 54 - - - - 22 14 - - - - - - - - 15 3 - - - - S10 FTTRSTFS TNYRSLG 8 372 6 - - - 44 54 - - 45 27 30 27 14 12 15 2 32 17 43 4 T11 TTRSTFST NYRSLGS 5 119 49 - 20 18 - - - - - - - - 9 8 - - 6 3 6 - Y13 RSTFSTNY RSLGSVQ 2 14 6 - - - - - - - 5 3 - - - - - - - - - - S15 TFSTNYRS LGSVQAP 9 683 46 - 21 12 34 29 - - 44 27 62 58 37 31 48 11 87 37 84 15 S18 TNYRSLGS VQAPSYG 9 812 64 - 24 15 89 90 - - 33 22 52 47 40 34 77 16 81 32 89 7 S23 LGSVQAPS YGARPVS 9 913 14 - 95 72 92 96 - - 20 12 40 35 84 75 77 17 70 30 80 4 Y24 GSVQAPSY GARPVSS 2 58 9 - 25 24 - - - - - - - - - - - - - - - - S30 SYGARPVS SAASVYA 9 1345 114 - 94 74 77 75 - - 102 58 103 94 110 98 70 14 105 44 95 18
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S7 _MSFTTRS TFSTNYR 5.2e-10 - - 6.2e-11 - -0.86 5.1e-3 - 0.38 1.5e-4 0.16 T8 MSFTTRST FSTNYRS 0.34 - - 0.34 - - - - - - - S10 FTTRSTFS TNYRSLG 2.7e-8 - - 3.4e-12 - -0.94 0.52 - - 3.4e-4 - T11 TTRSTFST NYRSLGS 0.72 - 0.72 - - - - - - - - Y13 RSTFSTNY RSLGSVQ - - - - - - - - - - - S15 TFSTNYRS LGSVQAP 2e-7 - 0.52 0.016 - 0.7 -0.19 2.4e-6 0.052 0.22 2.9e-6 S18 TNYRSLGS VQAPSYG 2.2e-5 - -0.88 0.27 - 0.1 0.15 1.3e-4 0.09 0.092 - S23 LGSVQAPS YGARPVS 2.3e-7 - 9.2e-10 6.6e-4 - -0.45 -0.11 1.2e-7 0.2 -0.94 - Y24 GSVQAPSY GARPVSS 3.1e-5 - 3.1e-5 - - - - - - - - S30 SYGARPVS SAASVYA 1e-18 - 0.12 -0.089 - 1.2e-3 3.2e-12 3.3e-14 0.073 0.82 1.1e-7
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S7
T8
S10
T11
Y13
S15
S18
S23
Y24
S30
S31
S34
Y36
S42
S44
S47
S51
T52
S53
S60
T65
S86
S93
S100
S127
S177
Y270
S272
S305
S312
S319
S323
S347
S398
S399
S401
T404
T408
S420
T422
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S7 T8 S10 T11 Y13 S15 S18 S23 Y24 S30 S31 S34 Y36 S42 S44 S47 S51 T52 S53 S60 T65 S86 S93 S100 S127 S177 Y270 S272 S305 S312 S319 S323 S347 S398 S399 S401 T404 T408 S420 T422 protein RNA SCNV methylation CCRCC S7 T8 S10 T11 Y13 S15 S18 S23 Y24 S30 S31 S34 Y36 S42 S44 S47 S51 T52 S53 S60 T65 S86 S93 S100 S127 S177 Y270 S272 S305 S312 S319 S323 S347 S398 S399 S401 T404 T408 S420 T422 protein RNA SCNV methylation COAD S7 T8 S10 T11 Y13 S15 S18 S23 Y24 S30 S31 S34 Y36 S42 S44 S47 S51 T52 S53 S60 T65 S86 S93 S100 S127 S177 Y270 S272 S305 S312 S319 S323 S347 S398 S399 S401 T404 T408 S420 T422 protein RNA SCNV methylation GBM S7 T8 S10 T11 Y13 S15 S18 S23 Y24 S30 S31 S34 Y36 S42 S44 S47 S51 T52 S53 S60 T65 S86 S93 S100 S127 S177 Y270 S272 S305 S312 S319 S323 S347 S398 S399 S401 T404 T408 S420 T422 protein RNA SCNV methylation HNSCC S7 T8 S10 T11 Y13 S15 S18 S23 Y24 S30 S31 S34 Y36 S42 S44 S47 S51 T52 S53 S60 T65 S86 S93 S100 S127 S177 Y270 S272 S305 S312 S319 S323 S347 S398 S399 S401 T404 T408 S420 T422 protein RNA SCNV methylation LSCC S7 T8 S10 T11 Y13 S15 S18 S23 Y24 S30 S31 S34 Y36 S42 S44 S47 S51 T52 S53 S60 T65 S86 S93 S100 S127 S177 Y270 S272 S305 S312 S319 S323 S347 S398 S399 S401 T404 T408 S420 T422 protein RNA SCNV methylation LUAD S7 T8 S10 T11 Y13 S15 S18 S23 Y24 S30 S31 S34 Y36 S42 S44 S47 S51 T52 S53 S60 T65 S86 S93 S100 S127 S177 Y270 S272 S305 S312 S319 S323 S347 S398 S399 S401 T404 T408 S420 T422 protein RNA SCNV methylation OV S7 T8 S10 T11 Y13 S15 S18 S23 Y24 S30 S31 S34 Y36 S42 S44 S47 S51 T52 S53 S60 T65 S86 S93 S100 S127 S177 Y270 S272 S305 S312 S319 S323 S347 S398 S399 S401 T404 T408 S420 T422 protein RNA SCNV methylation PDAC S7 T8 S10 T11 Y13 S15 S18 S23 Y24 S30 S31 S34 Y36 S42 S44 S47 S51 T52 S53 S60 T65 S86 S93 S100 S127 S177 Y270 S272 S305 S312 S319 S323 S347 S398 S399 S401 T404 T408 S420 T422 protein RNA SCNV methylation UCEC S7 T8 S10 T11 Y13 S15 S18 S23 Y24 S30 S31 S34 Y36 S42 S44 S47 S51 T52 S53 S60 T65 S86 S93 S100 S127 S177 Y270 S272 S305 S312 S319 S323 S347 S398 S399 S401 T404 T408 S420 T422 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S7
T8
S10
T11
Y13
S15
S18
S23
Y24
S30
S31
S34
Y36
S42
S44
S47
S51
T52
S53
S60
T65
S86
S93
S100
S127
S177
Y270
S272
S305
S312
S319
S323
S347
S398
S399
S401
T404
T408
S420
T422
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S7
T8
S10
T11
Y13
S15
S18
S23
Y24
S30
S31
S34
Y36
S42
S44
S47
S51
T52
S53
S60
T65
S86
S93
S100
S127
S177
Y270
S272
S305
S312
S319
S323
S347
S398
S399
S401
T404
T408
S420
T422
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.