SQSTM1:
sequestosome 1

Lollipop plot

Phosphosites location and occurrence

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Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S24AREIRRFSFCCSPEP1053841-258594888-221455383727729126013
S28RRFSFCCSPEPEAEA101174114-94724581-84501039310191631371288918
S143VGTRYKCSVCPDYDL340----------5498----122
Y148KCSVCPDYDLCSVCE245----------151488------
S152CPDYDLCSVCEGKGL71036--10380--90-9152103919382--101438918
S182LSEGFSHSRWLRKVK19------9-------------
S207MGPPGNWSPRPPRAG6864--9575--18-108628880110100--9236--
S226GPTAESASGPSEDPS376--77------982520------
S229AESASGPSEDPSVNF5356--7049------53495752--8414-
S233SGPSEDPSVNFLKNV7453--8664--18-171178724740--8372
Showing 1 to 10 of 38 rows
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S24AREIRRFSFCCSPEP0.11--6.8e-8-0.6-0.019--0.002-0.1
S28RRFSFCCSPEPEAEA9.3e-10-0.028---3.5e-34.7e-112.0e-60.794.3e-40.071
S143VGTRYKCSVCPDYDL-----------
Y148KCSVCPDYDLCSVCE-----------
S152CPDYDLCSVCEGKGL5.7e-46-1.6e-4--0.0243.8e-191e-25-1.2e-55e-7
S182LSEGFSHSRWLRKVK-----------
S207MGPPGNWSPRPPRAG2.5e-13-0.02--0.61.5e-66.1e-8-9.9e-4-
S226GPTAESASGPSEDPS9.2e-3------9.2e-3---
S229AESASGPSEDPSVNF1.4e-5-1.2e-3---0.117.4e-3---
S233SGPSEDPSVNFLKNV-0.77-5.3e-7----6e-8-0.92---
Showing 1 to 10 of 38 rows
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS24S28S143Y148S152S182S207S226S229S233S249S266T269S272S275S276S277T278S282S284S287S288S291S294T304S306S328S332T339S342S349T350S355S361S365S366S370S403proteinRNASCNVmethylationCCRCCS24S28S143Y148S152S182S207S226S229S233S249S266T269S272S275S276S277T278S282S284S287S288S291S294T304S306S328S332T339S342S349T350S355S361S365S366S370S403proteinRNASCNVmethylationCOADS24S28S143Y148S152S182S207S226S229S233S249S266T269S272S275S276S277T278S282S284S287S288S291S294T304S306S328S332T339S342S349T350S355S361S365S366S370S403proteinRNASCNVmethylationGBMS24S28S143Y148S152S182S207S226S229S233S249S266T269S272S275S276S277T278S282S284S287S288S291S294T304S306S328S332T339S342S349T350S355S361S365S366S370S403proteinRNASCNVmethylationHNSCCS24S28S143Y148S152S182S207S226S229S233S249S266T269S272S275S276S277T278S282S284S287S288S291S294T304S306S328S332T339S342S349T350S355S361S365S366S370S403proteinRNASCNVmethylationLSCCS24S28S143Y148S152S182S207S226S229S233S249S266T269S272S275S276S277T278S282S284S287S288S291S294T304S306S328S332T339S342S349T350S355S361S365S366S370S403proteinRNASCNVmethylationLUADS24S28S143Y148S152S182S207S226S229S233S249S266T269S272S275S276S277T278S282S284S287S288S291S294T304S306S328S332T339S342S349T350S355S361S365S366S370S403proteinRNASCNVmethylationOVS24S28S143Y148S152S182S207S226S229S233S249S266T269S272S275S276S277T278S282S284S287S288S291S294T304S306S328S332T339S342S349T350S355S361S365S366S370S403proteinRNASCNVmethylationPDACS24S28S143Y148S152S182S207S226S229S233S249S266T269S272S275S276S277T278S282S284S287S288S291S294T304S306S328S332T339S342S349T350S355S361S365S366S370S403proteinRNASCNVmethylationUCECS24S28S143Y148S152S182S207S226S229S233S249S266T269S272S275S276S277T278S282S284S287S288S291S294T304S306S328S332T339S342S349T350S355S361S365S366S370S403proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.