NR3C1: nuclear receptor subfamily 3 group C member 1
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1m2z chain A
1m2z chain D
1nhz chain A
1p93 chain A
1p93 chain B
1p93 chain C
1p93 chain D
3bqd chain A
3cld chain A
3cld chain B
3e7c chain A
3e7c chain B
3h52 chain A
3h52 chain B
3h52 chain C
3h52 chain D
3k22 chain A
3k22 chain B
3k23 chain A
3k23 chain B
3k23 chain C
4csj chain A
4hn5 chain A
4hn5 chain B
4hn6 chain A
4hn6 chain B
4lsj chain A
4mdd chain A
4mdd chain B
4p6w chain A
4p6x chain A
4p6x chain C
4p6x chain E
4p6x chain G
4p6x chain I
4p6x chain K
4udc chain A
4udd chain A
5cbx chain A
5cbx chain B
5cbx chain E
5cbx chain F
5cby chain A
5cby chain B
5cbz chain A
5cbz chain B
5cbz chain E
5cbz chain F
5cc1 chain A
5cc1 chain B
5cc1 chain W
5cc1 chain X
5e69 chain A
5e69 chain B
5e6a chain A
5e6a chain B
5e6b chain A
5e6b chain B
5e6c chain A
5e6c chain B
5e6d chain A
5e6d chain B
5emc chain A
5emc chain B
5emp chain A
5emp chain B
5emq chain A
5emq chain B
5g3j chain A
5g5w chain A
5nfp chain A
5nft chain A
5uc3 chain A
5uc3 chain B
5va0 chain A
5va0 chain B
5va7 chain A
5va7 chain B
6bqu chain A
6bqu chain B
6cfn chain A
6cfn chain B
6cfn chain C
6cfn chain D
6cfn chain E
6cfn chain F
6cfn chain G
6cfn chain H
6dxk chain A
6dxk chain B
6el6 chain A
6el7 chain A
6el9 chain A
6x6d chain A
6x6d chain B
6x6e chain A
6x6e chain B
6ymo chain C
6ymo chain D
6yo8 chain E
6yo8 chain F
6yo8 chain G
6yo8 chain H
6yos chain C
7krj chain D
7kw7 chain F
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T8 MDSKESLT PGREENP 10 1170 45 - 83 68 9 9 90 - 108 62 98 90 106 97 83 19 105 44 40 14 S44 ATVKVSAS SPSLAVA 4 88 - - - - - - - - - - 15 12 14 13 - - 18 4 12 - S45 TVKVSASS PSLAVAS 10 1080 65 - 76 56 22 23 90 - 96 56 88 81 97 89 7 2 94 37 83 18 S47 KVSASSPS LAVASQS 3 34 - - - - 7 11 9 - - - - - - - - - 5 2 - - S69 LVDFPKGS VSNAQQP 1 9 - - - - - - 9 - - - - - - - - - - - - - S85 LSKAVSLS MGLYMGE 1 10 - - - - - - - - - - 5 5 - - - - - - - - Y89 VSLSMGLY MGETETK 1 10 - - - - - - - - - - 5 5 - - - - - - - - S111 FPQQGQIS LSSGETD 7 343 8 - 57 40 - - 9 - - - 64 59 50 44 - - 4 2 6 - S113 QQGQISLS SGETDLK 3 31 - - - - - - - - 6 4 - - 5 4 - - - - 10 2 S125 DLKLLEES IANLNRS 1 9 - - - - - - - - - - 5 4 - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
T8 MDSKESLT PGREENP -3.1e-4 - 3.7e-5 - - 0.052 -1.3e-12 -0.012 -0.25 -5.4e-8 0.56 S44 ATVKVSAS SPSLAVA - - - - - - - - - - - S45 TVKVSASS PSLAVAS -5.9e-7 - 1.8e-3 -0.046 - -0.081 -7.5e-11 -7.2e-3 - -7.4e-6 0.28 S47 KVSASSPS LAVASQS - - - - - - - - - - - S69 LVDFPKGS VSNAQQP - - - - - - - - - - - S85 LSKAVSLS MGLYMGE - - - - - - - - - - - Y89 VSLSMGLY MGETETK - - - - - - - - - - - S111 FPQQGQIS LSSGETD -3e-10 - 2.2e-4 - - - -2.3e-18 -4.4e-9 - - - S113 QQGQISLS SGETDLK - - - - - - - - - - - S125 DLKLLEES IANLNRS - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
T8
S44
S45
S47
S69
S85
Y89
S111
S113
S125
S132
T133
S134
S141
S161
S164
S165
S200
S201
S203
S211
S226
S234
S241
S266
S267
S269
T288
S305
S370
Y393
S395
S397
S403
S404
S407
S408
S410
T411
T413
S508
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA T8 S44 S45 S47 S69 S85 Y89 S111 S113 S125 S132 T133 S134 S141 S161 S164 S165 S200 S201 S203 S211 S226 S234 S241 S266 S267 S269 T288 S305 S370 Y393 S395 S397 S403 S404 S407 S408 S410 T411 T413 S508 protein RNA SCNV methylation CCRCC T8 S44 S45 S47 S69 S85 Y89 S111 S113 S125 S132 T133 S134 S141 S161 S164 S165 S200 S201 S203 S211 S226 S234 S241 S266 S267 S269 T288 S305 S370 Y393 S395 S397 S403 S404 S407 S408 S410 T411 T413 S508 protein RNA SCNV methylation COAD T8 S44 S45 S47 S69 S85 Y89 S111 S113 S125 S132 T133 S134 S141 S161 S164 S165 S200 S201 S203 S211 S226 S234 S241 S266 S267 S269 T288 S305 S370 Y393 S395 S397 S403 S404 S407 S408 S410 T411 T413 S508 protein RNA SCNV methylation GBM T8 S44 S45 S47 S69 S85 Y89 S111 S113 S125 S132 T133 S134 S141 S161 S164 S165 S200 S201 S203 S211 S226 S234 S241 S266 S267 S269 T288 S305 S370 Y393 S395 S397 S403 S404 S407 S408 S410 T411 T413 S508 protein RNA SCNV methylation HNSCC T8 S44 S45 S47 S69 S85 Y89 S111 S113 S125 S132 T133 S134 S141 S161 S164 S165 S200 S201 S203 S211 S226 S234 S241 S266 S267 S269 T288 S305 S370 Y393 S395 S397 S403 S404 S407 S408 S410 T411 T413 S508 protein RNA SCNV methylation LSCC T8 S44 S45 S47 S69 S85 Y89 S111 S113 S125 S132 T133 S134 S141 S161 S164 S165 S200 S201 S203 S211 S226 S234 S241 S266 S267 S269 T288 S305 S370 Y393 S395 S397 S403 S404 S407 S408 S410 T411 T413 S508 protein RNA SCNV methylation LUAD T8 S44 S45 S47 S69 S85 Y89 S111 S113 S125 S132 T133 S134 S141 S161 S164 S165 S200 S201 S203 S211 S226 S234 S241 S266 S267 S269 T288 S305 S370 Y393 S395 S397 S403 S404 S407 S408 S410 T411 T413 S508 protein RNA SCNV methylation OV T8 S44 S45 S47 S69 S85 Y89 S111 S113 S125 S132 T133 S134 S141 S161 S164 S165 S200 S201 S203 S211 S226 S234 S241 S266 S267 S269 T288 S305 S370 Y393 S395 S397 S403 S404 S407 S408 S410 T411 T413 S508 protein RNA SCNV methylation PDAC T8 S44 S45 S47 S69 S85 Y89 S111 S113 S125 S132 T133 S134 S141 S161 S164 S165 S200 S201 S203 S211 S226 S234 S241 S266 S267 S269 T288 S305 S370 Y393 S395 S397 S403 S404 S407 S408 S410 T411 T413 S508 protein RNA SCNV methylation UCEC T8 S44 S45 S47 S69 S85 Y89 S111 S113 S125 S132 T133 S134 S141 S161 S164 S165 S200 S201 S203 S211 S226 S234 S241 S266 S267 S269 T288 S305 S370 Y393 S395 S397 S403 S404 S407 S408 S410 T411 T413 S508 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
T8
S44
S45
S47
S69
S85
Y89
S111
S113
S125
S132
T133
S134
S141
S161
S164
S165
S200
S201
S203
S211
S226
S234
S241
S266
S267
S269
T288
S305
S370
Y393
S395
S397
S403
S404
S407
S408
S410
T411
T413
S508
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
T8
S44
S45
S47
S69
S85
Y89
S111
S113
S125
S132
T133
S134
S141
S161
S164
S165
S200
S201
S203
S211
S226
S234
S241
S266
S267
S269
T288
S305
S370
Y393
S395
S397
S403
S404
S407
S408
S410
T411
T413
S508
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.