PHF20L1: PHD finger protein 20 like 1
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
2eqm chain A
2equ chain A
2jtf chain A
6l0x chain A
6l0x chain B
6l10 chain A
6l10 chain B
6l10 chain C
6l10 chain D
6l1c chain A
6l1f chain B
6l1i chain B
6l1p chain A
6l1p chain B
6l1p chain C
6l1p chain D
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T224 ETSTCIAT PDVEKKE 4 84 - - 5 4 - - - - - - - - 8 8 - - 11 5 37 6 S270 RKNNQGNS FQAKRAR 6 131 13 - 5 4 - - 46 - - - 5 5 13 11 - - - - 25 4 S313 PMLEQAIS PKPQSQK 2 35 - - - - - - - - 16 10 - - - - - - 5 4 - - S356 SKKCKHES GDSSGCI 7 462 26 - 24 24 - - - - 91 52 25 24 67 59 - - 42 19 7 2 S359 CKHESGDS SGCIKPP 2 19 - - - - - - - - - - 5 5 - - - - - - 7 2 S368 GCIKPPKS PLSPELI 3 85 - - 33 24 - - - - 11 8 5 4 - - - - - - - - S371 KPPKSPLS PELIQVE 1 9 - - - - - - - - 5 4 - - - - - - - - - - S395 SSVINKTS PPQPVNP 9 495 16 - 66 61 - - 9 - 45 25 10 9 40 36 7 1 52 25 77 16 T420 RRSQRLAT LPMPDDS 8 576 49 - 70 51 - - - - 7 2 44 41 88 80 7 1 16 7 95 18 S427 TLPMPDDS VEKVSSP 1 6 - - - - - - - - - - - - - - - - - - 6 -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
T224 ETSTCIAT PDVEKKE - - - - - - - - - - - S270 RKNNQGNS FQAKRAR - - - - - - - - - - - S313 PMLEQAIS PKPQSQK - - - - - - - - - - - S356 SKKCKHES GDSSGCI 7e-23 - 0.86 - - 5.8e-10 5.8e-10 2.4e-17 - 0.33 - S359 CKHESGDS SGCIKPP - - - - - - - - - - - S368 GCIKPPKS PLSPELI -0.88 - -0.88 - - - - - - - - S371 KPPKSPLS PELIQVE - - - - - - - - - - - S395 SSVINKTS PPQPVNP 0.071 - -0.62 - - 0.24 - 6.7e-3 - -0.015 2.2e-3 T420 RRSQRLAT LPMPDDS 0.42 - 3e-7 - - - -0.024 -0.037 - - -0.017 S427 TLPMPDDS VEKVSSP - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
T224
S270
S313
S356
S359
S368
S371
S395
T420
S427
S433
S435
S478
S481
S584
S589
S590
S599
S604
S607
S881
S882
S888
S889
S907
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA T224 S270 S313 S356 S359 S368 S371 S395 T420 S427 S433 S435 S478 S481 S584 S589 S590 S599 S604 S607 S881 S882 S888 S889 S907 protein RNA SCNV methylation CCRCC T224 S270 S313 S356 S359 S368 S371 S395 T420 S427 S433 S435 S478 S481 S584 S589 S590 S599 S604 S607 S881 S882 S888 S889 S907 protein RNA SCNV methylation COAD T224 S270 S313 S356 S359 S368 S371 S395 T420 S427 S433 S435 S478 S481 S584 S589 S590 S599 S604 S607 S881 S882 S888 S889 S907 protein RNA SCNV methylation GBM T224 S270 S313 S356 S359 S368 S371 S395 T420 S427 S433 S435 S478 S481 S584 S589 S590 S599 S604 S607 S881 S882 S888 S889 S907 protein RNA SCNV methylation HNSCC T224 S270 S313 S356 S359 S368 S371 S395 T420 S427 S433 S435 S478 S481 S584 S589 S590 S599 S604 S607 S881 S882 S888 S889 S907 protein RNA SCNV methylation LSCC T224 S270 S313 S356 S359 S368 S371 S395 T420 S427 S433 S435 S478 S481 S584 S589 S590 S599 S604 S607 S881 S882 S888 S889 S907 protein RNA SCNV methylation LUAD T224 S270 S313 S356 S359 S368 S371 S395 T420 S427 S433 S435 S478 S481 S584 S589 S590 S599 S604 S607 S881 S882 S888 S889 S907 protein RNA SCNV methylation OV T224 S270 S313 S356 S359 S368 S371 S395 T420 S427 S433 S435 S478 S481 S584 S589 S590 S599 S604 S607 S881 S882 S888 S889 S907 protein RNA SCNV methylation PDAC T224 S270 S313 S356 S359 S368 S371 S395 T420 S427 S433 S435 S478 S481 S584 S589 S590 S599 S604 S607 S881 S882 S888 S889 S907 protein RNA SCNV methylation UCEC T224 S270 S313 S356 S359 S368 S371 S395 T420 S427 S433 S435 S478 S481 S584 S589 S590 S599 S604 S607 S881 S882 S888 S889 S907 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
T224
S270
S313
S356
S359
S368
S371
S395
T420
S427
S433
S435
S478
S481
S584
S589
S590
S599
S604
S607
S881
S882
S888
S889
S907
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
T224
S270
S313
S356
S359
S368
S371
S395
T420
S427
S433
S435
S478
S481
S584
S589
S590
S599
S604
S607
S881
S882
S888
S889
S907
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.