HLA-DRA: major histocompatibility complex, class II, DR alpha
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1a6a chain A
1aqd chain A
1aqd chain D
1aqd chain G
1aqd chain J
1bx2 chain A
1bx2 chain D
1d5m chain A
1d5x chain A
1d5z chain A
1d6e chain A
1dlh chain A
1dlh chain D
1fv1 chain A
1fv1 chain D
1fyt chain A
1h15 chain A
1h15 chain D
1hqr chain A
1hxy chain A
1j8h chain A
1jwm chain A
1jws chain A
1jwu chain A
1kg0 chain A
1klg chain A
1klu chain A
1lo5 chain A
1pyw chain A
1r5i chain A
1r5i chain E
1seb chain A
1seb chain E
1sje chain A
1sjh chain A
1t5w chain A
1t5w chain D
1t5x chain A
1ymm chain A
1zgl chain A
1zgl chain D
1zgl chain G
1zgl chain J
2fse chain A
2fse chain C
2g9h chain A
2iam chain A
2ian chain A
2ian chain F
2ian chain K
2ian chain P
2icw chain A
2icw chain D
2ipk chain A
2oje chain A
2oje chain E
2q6w chain A
2q6w chain D
2seb chain A
2wbj chain A
2wbj chain E
2xn9 chain D
3c5j chain A
3l6f chain A
3o6f chain A
3o6f chain E
3pdo chain A
3pgc chain A
3pgc chain D
3pgd chain A
3pgd chain D
3qxa chain A
3qxa chain D
3qxd chain A
3qxd chain D
3s4s chain A
3s4s chain D
3s5l chain A
3s5l chain D
3t0e chain A
4aen chain A
4ah2 chain A
4c56 chain D
4c56 chain J
4e41 chain A
4e41 chain F
4fqx chain A
4gbx chain A
4h1l chain A
4h1l chain D
4h25 chain A
4h25 chain D
4h26 chain A
4h26 chain D
4i5b chain A
4i5b chain D
4is6 chain A
4mcy chain A
4mcz chain A
4md0 chain A
4md4 chain A
4md5 chain A
4mdi chain A
4mdj chain A
4ov5 chain A
4ov5 chain D
4ov5 chain G
4ov5 chain J
4ov5 chain M
4ov5 chain P
4x5w chain A
4x5x chain A
4x5x chain C
4y19 chain A
4y1a chain A
5jlz chain A
5jlz chain C
5lax chain A
5lax chain C
5ni9 chain A
5nig chain A
5v4m chain A
5v4m chain D
5v4m chain G
5v4m chain J
5v4n chain A
5v4n chain D
6atf chain A
6atf chain D
6ati chain A
6ati chain D
6atz chain A
6atz chain C
6bij chain A
6bil chain A
6bin chain A
6bir chain A
6biv chain B
6bix chain A
6biy chain A
6biz chain A
6cpl chain A
6cpn chain A
6cpo chain A
6cpo chain D
6cqj chain A
6cqj chain D
6cqj chain G
6cql chain A
6cqn chain A
6cqq chain A
6cqq chain F
6cqr chain A
6cqr chain F
6hby chain A
6hby chain D
6nix chain A
6qza chain AAA
6qza chain DDD
6qzc chain AAA
6qzd chain AAA
6qzd chain DDD
6r0e chain AAA
6v0y chain A
6v13 chain A
6v15 chain A
6v18 chain A
6v19 chain A
6v1a chain A
7n19 chain A
7n19 chain D
7n19 chain G
7n19 chain J
7nze chain AAA
7nze chain CCC
7o00 chain AAA
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S78 EEFGRFAS FEAQGAL 6 392 38 - 23 7 - - - - 29 17 59 52 85 77 - - 3 2 - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S78 EEFGRFAS FEAQGAL -0.25 - - - - 0.8 -0.053 -0.75 - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S78
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S78 protein RNA SCNV methylation CCRCC S78 protein RNA SCNV methylation COAD S78 protein RNA SCNV methylation GBM S78 protein RNA SCNV methylation HNSCC S78 protein RNA SCNV methylation LSCC S78 protein RNA SCNV methylation LUAD S78 protein RNA SCNV methylation OV S78 protein RNA SCNV methylation PDAC S78 protein RNA SCNV methylation UCEC S78 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S78
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S78
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.