LDHB: lactate dehydrogenase B
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1i0z chain A
1i0z chain B
1t2f chain A
1t2f chain B
1t2f chain C
1t2f chain D
7dbj chain A
7dbj chain B
7dbj chain C
7dbj chain D
7dbk chain A
7dbk chain B
7dbk chain C
7dbk chain D
7dbk chain E
7dbk chain F
7dbk chain G
7dbk chain H
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T302 ILNARGLT SVINQKL 1 8 - - 4 4 - - - - - - - - - - - - - - - - S303 LNARGLTS VINQKLK 6 241 - - 54 43 - - 9 - 28 17 10 9 12 12 - - - - 29 18
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
T302 ILNARGLT SVINQKL - - - - - - - - - - - S303 LNARGLTS VINQKLK -4.8e-5 - -3.8e-16 - - -0.94 - - - - 0.24
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
T302
S303
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA T302 S303 protein RNA SCNV methylation CCRCC T302 S303 protein RNA SCNV methylation COAD T302 S303 protein RNA SCNV methylation GBM T302 S303 protein RNA SCNV methylation HNSCC T302 S303 protein RNA SCNV methylation LSCC T302 S303 protein RNA SCNV methylation LUAD T302 S303 protein RNA SCNV methylation OV T302 S303 protein RNA SCNV methylation PDAC T302 S303 protein RNA SCNV methylation UCEC T302 S303 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
T302
S303
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
T302
S303
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.