Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S34 LRSRGRAS PGGVSTS 10 1307 122 - 33 30 91 97 99 - 98 57 103 95 60 58 83 19 105 44 95 18 S39 RASPGGVS TSSSDGK 6 164 64 - 9 8 - - - - 28 18 10 10 - - - - 9 2 6 - T40 ASPGGVST SSSDGKA 4 38 9 - - - - - 9 - - - 5 4 - - - - 9 2 - - S41 SPGGVSTS SSDGKAE 2 15 - - - - - - - - - - 5 4 - - - - - - 6 - S42 PGGVSTSS SDGKAEK 3 61 - - - - - - 19 - - - - - - - 7 1 - - 32 2 S43 GGVSTSSS DGKAEKS 1 6 - - - - - - - - - - - - - - - - - - 6 - T64 ARVEEAST PKVNKQG 3 65 22 - - - - - - - - - 9 9 - - 21 4 - - - - S73 KVNKQGRS EEISESE 5 132 41 - - - - - 27 - - - 4 4 - - - - 8 3 29 16 S77 QGRSEEIS ESESEET 10 593 42 - 4 4 29 33 99 - 36 18 24 22 31 28 42 9 41 18 95 18 S79 RSEEISES ESEETNA 10 353 42 - 12 4 5 4 99 - 17 10 45 43 4 4 11 5 26 14 6 2
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S34 LRSRGRAS PGGVSTS 4.6e-5 - -2.1e-4 2.5e-9 - 1.5e-3 9.5e-10 5.8e-11 0.76 -1e-12 0.81 S39 RASPGGVS TSSSDGK 1.3e-3 - - - - 1.3e-3 - - - - - T40 ASPGGVST SSSDGKA - - - - - - - - - - - S41 SPGGVSTS SSDGKAE - - - - - - - - - - - S42 PGGVSTSS SDGKAEK - - - - - - - - - - - S43 GGVSTSSS DGKAEKS - - - - - - - - - - - T64 ARVEEAST PKVNKQG - - - - - - - - - - - S73 KVNKQGRS EEISESE -0.024 - - - - - - - - - -0.024 S77 QGRSEEIS ESESEET 0.2 - - 4.3e-3 - 0.54 1.4e-6 0.14 - -0.17 -1.4e-7 S79 RSEEISES ESEETNA 0.2 - - - - - 0.034 - - -0.77 -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S34
S39
T40
S41
S42
S43
T64
S73
S77
S79
S81
S101
S103
S107
S112
S118
S119
T131
S132
S134
S168
S355
S632
S645
T651
T653
Y657
S661
T669
S677
T736
S739
S746
S748
S896
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S34 S39 T40 S41 S42 S43 T64 S73 S77 S79 S81 S101 S103 S107 S112 S118 S119 T131 S132 S134 S168 S355 S632 S645 T651 T653 Y657 S661 T669 S677 T736 S739 S746 S748 S896 protein RNA SCNV methylation CCRCC S34 S39 T40 S41 S42 S43 T64 S73 S77 S79 S81 S101 S103 S107 S112 S118 S119 T131 S132 S134 S168 S355 S632 S645 T651 T653 Y657 S661 T669 S677 T736 S739 S746 S748 S896 protein RNA SCNV methylation COAD S34 S39 T40 S41 S42 S43 T64 S73 S77 S79 S81 S101 S103 S107 S112 S118 S119 T131 S132 S134 S168 S355 S632 S645 T651 T653 Y657 S661 T669 S677 T736 S739 S746 S748 S896 protein RNA SCNV methylation GBM S34 S39 T40 S41 S42 S43 T64 S73 S77 S79 S81 S101 S103 S107 S112 S118 S119 T131 S132 S134 S168 S355 S632 S645 T651 T653 Y657 S661 T669 S677 T736 S739 S746 S748 S896 protein RNA SCNV methylation HNSCC S34 S39 T40 S41 S42 S43 T64 S73 S77 S79 S81 S101 S103 S107 S112 S118 S119 T131 S132 S134 S168 S355 S632 S645 T651 T653 Y657 S661 T669 S677 T736 S739 S746 S748 S896 protein RNA SCNV methylation LSCC S34 S39 T40 S41 S42 S43 T64 S73 S77 S79 S81 S101 S103 S107 S112 S118 S119 T131 S132 S134 S168 S355 S632 S645 T651 T653 Y657 S661 T669 S677 T736 S739 S746 S748 S896 protein RNA SCNV methylation LUAD S34 S39 T40 S41 S42 S43 T64 S73 S77 S79 S81 S101 S103 S107 S112 S118 S119 T131 S132 S134 S168 S355 S632 S645 T651 T653 Y657 S661 T669 S677 T736 S739 S746 S748 S896 protein RNA SCNV methylation OV S34 S39 T40 S41 S42 S43 T64 S73 S77 S79 S81 S101 S103 S107 S112 S118 S119 T131 S132 S134 S168 S355 S632 S645 T651 T653 Y657 S661 T669 S677 T736 S739 S746 S748 S896 protein RNA SCNV methylation PDAC S34 S39 T40 S41 S42 S43 T64 S73 S77 S79 S81 S101 S103 S107 S112 S118 S119 T131 S132 S134 S168 S355 S632 S645 T651 T653 Y657 S661 T669 S677 T736 S739 S746 S748 S896 protein RNA SCNV methylation UCEC S34 S39 T40 S41 S42 S43 T64 S73 S77 S79 S81 S101 S103 S107 S112 S118 S119 T131 S132 S134 S168 S355 S632 S645 T651 T653 Y657 S661 T669 S677 T736 S739 S746 S748 S896 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S34
S39
T40
S41
S42
S43
T64
S73
S77
S79
S81
S101
S103
S107
S112
S118
S119
T131
S132
S134
S168
S355
S632
S645
T651
T653
Y657
S661
T669
S677
T736
S739
S746
S748
S896
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S34
S39
T40
S41
S42
S43
T64
S73
S77
S79
S81
S101
S103
S107
S112
S118
S119
T131
S132
S134
S168
S355
S632
S645
T651
T653
Y657
S661
T669
S677
T736
S739
S746
S748
S896
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.