Protein: ENSP00000381634
Gene: SLC38A1

LinkedOmicsKB © 2022-2023 Zhang Lab

SLC38A1:
solute carrier family 38 member 1

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S6__MMHFKSGLELTEL19------------------72
T17LTELQNMTVPEDDNI775--98108--635454--328-
S25VPEDDNISNDSNDFT94589-1211575916-5933547264--2310177
S28DDNISNDSNDFTEVE948016-1312101651-6364566760--6427132
T32SNDSNDFTEVENGQI492--2424----631514------6-
S49KFISDRESRRSLTNS10144399-103809710089-108621089910698681799425018
S52SDRESRRSLTNSHLE10141680-7653879299-1086210898102938319105448918
T54RESRRSLTNSHLEKK71938---42309-631512--4110125--
S56SRRSLTNSHLEKKKC939824-201934299-7341109--641333146-
Showing 1 to 9 of 9 rows

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S6__MMHFKSGLELTEL-----------
T17LTELQNMTVPEDDNI-----------
S25VPEDDNISNDSNDFT1e-16--2.4e-11-4.7e-10-0.023-0.16-
S28DDNISNDSNDFTEVE5.2e-14-----7.1e-170.028-0.012-
T32SNDSNDFTEVENGQI2.0e-5-2.0e-5--------
S49KFISDRESRRSLTNS6.2e-27-2.1e-130.046-1.8e-151.1e-280.11.3e-3-4.1e-92.6e-3
S52SDRESRRSLTNSHLE8.4e-37-1.7e-150.11-1.5e-184.9e-321.3e-83.5e-6-1.8e-90.17
T54RESRRSLTNSHLEKK1.4e-8--2.2e-6----0.001--
S56SRRSLTNSHLEKKKC1.2e-11-8.8e-47.8e-4-1.1e-9--2.8e-4-0.21-
Showing 1 to 9 of 9 rows

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS6T17S25S28T32S49S52T54S56proteinRNASCNVmethylationCCRCCS6T17S25S28T32S49S52T54S56proteinRNASCNVmethylationCOADS6T17S25S28T32S49S52T54S56proteinRNASCNVmethylationGBMS6T17S25S28T32S49S52T54S56proteinRNASCNVmethylationHNSCCS6T17S25S28T32S49S52T54S56proteinRNASCNVmethylationLSCCS6T17S25S28T32S49S52T54S56proteinRNASCNVmethylationLUADS6T17S25S28T32S49S52T54S56proteinRNASCNVmethylationOVS6T17S25S28T32S49S52T54S56proteinRNASCNVmethylationPDACS6T17S25S28T32S49S52T54S56proteinRNASCNVmethylationUCECS6T17S25S28T32S49S52T54S56proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.