Protein: ENSP00000383411
Gene: SAMSN1

LinkedOmicsKB © 2022-2023 Zhang Lab

SAMSN1:
SAM domain, SH3 domain and nuclear localization signals 1

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S7_MLKRKPSNVSEKEK7798--2927--99-864888816257--105445913
S10KRKPSNVSEKEKHQK5108------18-63--1816--261272
S23QKPKRSSSFGNFDRF101356105-7866797399-8648989095897518102429518
S34FDRFRNNSLSKPDDS61299-113--27-------27625912-
S36RFRNNSLSKPDDSTE5220----232181-------183188435
T42LSKPDDSTEAHEGDP3269-8---------54------
T50EAHEGDPTNGSGEQS18------------44------
S74GKKMRAISWTMKKKV963424-44--99-462474665851287783041-
S90KKYIKALSEEKDEED10112987-92779710046-108626559676154138838132
Y104DGENAHPYRNSDPVI521859-262299--19103430--------
Showing 1 to 10 of 24 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S7_MLKRKPSNVSEKEK1.2e-8-7.4e-5--0.514.4e-45.8e-7-9.5e-3-0.076
S10KRKPSNVSEKEKHQK0.012--------0.012-
S23QKPKRSSSFGNFDRF1.9e-60-7.5e-194.2e-5-4.1e-187e-103e-116.6e-51.8e-80.021
S34FDRFRNNSLSKPDDS-----------
S36RFRNNSLSKPDDSTE0.43--0.43-------
T42LSKPDDSTEAHEGDP-----------
T50EAHEGDPTNGSGEQS-----------
S74GKKMRAISWTMKKKV6.3e-20----5.6e-120.219.7e-7-1.6e-7-
S90KKYIKALSEEKDEED2.7e-19-2.5e-190.012-2.8e-10-7.2e-40.297.5e-32.4e-8-
Y104DGENAHPYRNSDPVI0.072-6.3e-8----4.1e-3----
Showing 1 to 10 of 24 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS7S10S23S34S36T42T50S74S90Y104S107S119S125S128Y130S131S223S297S319S343S344S347S356S372proteinRNASCNVmethylationCCRCCS7S10S23S34S36T42T50S74S90Y104S107S119S125S128Y130S131S223S297S319S343S344S347S356S372proteinRNASCNVmethylationCOADS7S10S23S34S36T42T50S74S90Y104S107S119S125S128Y130S131S223S297S319S343S344S347S356S372proteinRNASCNVmethylationGBMS7S10S23S34S36T42T50S74S90Y104S107S119S125S128Y130S131S223S297S319S343S344S347S356S372proteinRNASCNVmethylationHNSCCS7S10S23S34S36T42T50S74S90Y104S107S119S125S128Y130S131S223S297S319S343S344S347S356S372proteinRNASCNVmethylationLSCCS7S10S23S34S36T42T50S74S90Y104S107S119S125S128Y130S131S223S297S319S343S344S347S356S372proteinRNASCNVmethylationLUADS7S10S23S34S36T42T50S74S90Y104S107S119S125S128Y130S131S223S297S319S343S344S347S356S372proteinRNASCNVmethylationOVS7S10S23S34S36T42T50S74S90Y104S107S119S125S128Y130S131S223S297S319S343S344S347S356S372proteinRNASCNVmethylationPDACS7S10S23S34S36T42T50S74S90Y104S107S119S125S128Y130S131S223S297S319S343S344S347S356S372proteinRNASCNVmethylationUCECS7S10S23S34S36T42T50S74S90Y104S107S119S125S128Y130S131S223S297S319S343S344S347S356S372proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.