Protein: ENSP00000390181

RIF1:: replication timing regulatory factor 1

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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				BRCA		CCRCC		COAD		GBM		HNSCC		LSCC		LUAD		OV		PDAC		UCEC
Site	Sequence	Cohorts	Total	T	N	T	N	T	N	T	N	T	N	T	N	T	N	T	N	T	N	T	N
S7	_MTARGQSPLAPLLE	8	229	34	-	9	8	-	-	16	-	22	13	37	34	19	16	13	2	5	1	-	-
S402	PVHKGASSPYGAPGT	9	499	16	-	-	-	20	16	44	-	23	14	68	61	23	20	55	13	38	17	57	14
Y404	HKGASSPYGAPGTPR	1	20	-	-	-	-	-	-	-	-	-	-	10	10	-	-	-	-	-	-	-	-
T409	SPYGAPGTPRMNLSS	7	323	46	-	-	-	5	4	-	-	7	3	54	51	33	28	25	9	-	-	51	7
S533	VLTLLLKSLESIVKS	10	707	40	-	25	22	12	15	63	-	29	13	78	73	74	66	55	13	53	20	54	2
S782	KYQPKVKSPQRPSDW	10	1352	78	-	90	68	97	100	99	-	103	59	103	95	102	93	13	3	100	42	89	18
S1008	KSNGKRDSFLAQTKN	9	230	17	-	8	-	-	-	45	-	5	3	15	15	9	8	21	4	13	7	54	6
S1046	ILLEEEKSTDFVFIP	9	1076	81	-	70	58	-	-	99	-	95	56	78	73	106	97	7	1	105	44	88	18
T1047	LLEEEKSTDFVFIPP	2	46	-	-	-	-	-	-	-	-	-	-	20	18	4	4	-	-	-	-	-	-
S1089	MYNNLDVSQDTLFTQ	4	111	8	-	-	-	-	-	9	-	18	10	35	31	-	-	-	-	-	-	-	-

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Tumor and normal comparison

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Site	Sequence	Meta P	BRCA	CCRCC	COAD	GBM	HNSCC	LSCC	LUAD	OV	PDAC	UCEC
S7	_MTARGQSPLAPLLE	-0.026	-	-	-	-	-0.024	-0.37	-	-	-	-
S402	PVHKGASSPYGAPGT	9.5e-11	-	-	4.2e-5	-	0.031	4.2e-14	3.1e-4	0.77	-1.4e-6	2.2e-5
Y404	HKGASSPYGAPGTPR	-	-	-	-	-	-	-	-	-	-	-
T409	SPYGAPGTPRMNLSS	4.9e-22	-	-	-	-	-	1.5e-13	3.9e-10	-	-	-
S533	VLTLLLKSLESIVKS	1.4e-4	-	-1.9e-3	-	-	-0.4	-0.44	4e-17	0.39	2.1e-6	-
S782	KYQPKVKSPQRPSDW	3.3e-118	-	6.2e-12	2.4e-32	-	9.5e-20	1.8e-33	1.2e-31	-	6.5e-9	1.6e-4
S1008	KSNGKRDSFLAQTKN	-	-	-	-	-	-	-	-	-	-	-
S1046	ILLEEEKSTDFVFIP	0.08	-	8.6e-5	-	-	3.1e-6	4.4e-5	-0.14	-	-5.8e-4	-4.7e-4
T1047	LLEEEKSTDFVFIPP	0.048	-	-	-	-	-	0.048	-	-	-	-
S1089	MYNNLDVSQDTLFTQ	0.13	-	-	-	-	-	0.13	-	-	-	-

Showing 1 to 10 of 93 rows

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* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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			Signed p-values
Phenotype	Site	Meta P	BRCA	CCRCC	COAD	GBM	HNSCC	LSCC	LUAD	OV	PDAC	UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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			Signed p-values
Kinase	Site	Meta P	BRCA	CCRCC	COAD	GBM	HNSCC	LSCC	LUAD	OV	PDAC	UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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			Signed p-values
Phosphatase	Site	Meta P	BRCA	CCRCC	COAD	GBM	HNSCC	LSCC	LUAD	OV	PDAC	UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Protein: ENSP00000390181Gene: RIF1

Lollipop plot

Phosphosite detection coverage

Tumor and normal comparison

Phenotype and mutation association

Cis-association

Kinase association

Phosphatase association

Protein: ENSP00000390181
Gene: RIF1