HLA-DPB1: major histocompatibility complex, class II, DP beta 1
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
3lqz chain B
4p4k chain B
4p4k chain F
4p4r chain B
4p4r chain D
4p57 chain B
4p57 chain D
4p5k chain B
4p5k chain E
4p5m chain B
4p5m chain D
4p5m chain F
4p5m chain H
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
Y87 LGRPAAEY WNSQKDI 1 8 8 - - - - - - - - - - - - - - - - - - - S90 PAAEYWNS QKDILEE 1 8 8 - - - - - - - - - - - - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Y87 LGRPAAEY WNSQKDI - - - - - - - - - - - S90 PAAEYWNS QKDILEE - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
Y87
S90
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA Y87 S90 protein RNA SCNV methylation CCRCC Y87 S90 protein RNA SCNV methylation COAD Y87 S90 protein RNA SCNV methylation GBM Y87 S90 protein RNA SCNV methylation HNSCC Y87 S90 protein RNA SCNV methylation LSCC Y87 S90 protein RNA SCNV methylation LUAD Y87 S90 protein RNA SCNV methylation OV Y87 S90 protein RNA SCNV methylation PDAC Y87 S90 protein RNA SCNV methylation UCEC Y87 S90 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
Y87
S90
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
Y87
S90
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.