TOMM40: translocase of outer mitochondrial membrane 40
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
7ck6 chain A
7ck6 chain B
7cp9 chain I
7cp9 chain J
7vd2 chain B
7vd2 chain I
7vdd chain B
7vdd chain I
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S142 YVGTKQLS PTEAFPV 2 45 - - - - - - 35 - 6 4 - - - - - - - - - - T144 GTKQLSPT EAFPVLV 2 24 - - 8 8 - - - - - - - - 4 4 - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S142 YVGTKQLS PTEAFPV - - - - - - - - - - - T144 GTKQLSPT EAFPVLV - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S142
T144
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S142 T144 protein RNA SCNV methylation CCRCC S142 T144 protein RNA SCNV methylation COAD S142 T144 protein RNA SCNV methylation GBM S142 T144 protein RNA SCNV methylation HNSCC S142 T144 protein RNA SCNV methylation LSCC S142 T144 protein RNA SCNV methylation LUAD S142 T144 protein RNA SCNV methylation OV S142 T144 protein RNA SCNV methylation PDAC S142 T144 protein RNA SCNV methylation UCEC S142 T144 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S142
T144
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S142
T144
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.