Protein: ENSP00000417401
Gene: HELZ2

LinkedOmicsKB © 2022-2023 Zhang Lab

HELZ2:
helicase with zinc finger 2

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T19LQRGDLLTPPAPDGD119--------136----------
S150AEYQRSSSEVLVLAE117------------98------
S338SVASGPISPTNYRQR101163114-4036545464-1035998909385571276298118
Y342GPISPTNYRQRMHQF218--------5355--------
S440VRLERRASSEQALWL3297-------105--43------
S1006EPGDEALSPASRDIT6124------8-6430271312--8313-
S1241PSQVPIYSLRKGRLQ120--------137----------
S1262LTAEARHSRLFWVQI18------8-------------
Y1278LWRQGFYYPLGIVRE18------8-------------
S2021GLPAPTASPRPGPSS493--------631093228--32--
Showing 1 to 10 of 15 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
T19LQRGDLLTPPAPDGD-----------
S150AEYQRSSSEVLVLAE-----------
S338SVASGPISPTNYRQR7.2e-57-7.9e-73.8e-14-4.1e-162.4e-161.5e-130.182.5e-90.16
Y342GPISPTNYRQRMHQF-----------
S440VRLERRASSEQALWL-----------
S1006EPGDEALSPASRDIT0.072-----0.072----
S1241PSQVPIYSLRKGRLQ-----------
S1262LTAEARHSRLFWVQI-----------
Y1278LWRQGFYYPLGIVRE-----------
S2021GLPAPTASPRPGPSS0.61------0.61---
Showing 1 to 10 of 15 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAT19S150S338Y342S440S1006S1241S1262Y1278S2021S2027S2028Y2245S2246S2622proteinRNASCNVmethylationCCRCCT19S150S338Y342S440S1006S1241S1262Y1278S2021S2027S2028Y2245S2246S2622proteinRNASCNVmethylationCOADT19S150S338Y342S440S1006S1241S1262Y1278S2021S2027S2028Y2245S2246S2622proteinRNASCNVmethylationGBMT19S150S338Y342S440S1006S1241S1262Y1278S2021S2027S2028Y2245S2246S2622proteinRNASCNVmethylationHNSCCT19S150S338Y342S440S1006S1241S1262Y1278S2021S2027S2028Y2245S2246S2622proteinRNASCNVmethylationLSCCT19S150S338Y342S440S1006S1241S1262Y1278S2021S2027S2028Y2245S2246S2622proteinRNASCNVmethylationLUADT19S150S338Y342S440S1006S1241S1262Y1278S2021S2027S2028Y2245S2246S2622proteinRNASCNVmethylationOVT19S150S338Y342S440S1006S1241S1262Y1278S2021S2027S2028Y2245S2246S2622proteinRNASCNVmethylationPDACT19S150S338Y342S440S1006S1241S1262Y1278S2021S2027S2028Y2245S2246S2622proteinRNASCNVmethylationUCECT19S150S338Y342S440S1006S1241S1262Y1278S2021S2027S2028Y2245S2246S2622proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.