RPL37A: ribosomal protein L37a
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
4ug0 chain Lp
4v6x chain Cp
5aj0 chain Ap
5lks chain Lp
5t2c chain j
6ip5 chain 2j
6ip6 chain 2j
6ip8 chain 2j
6lqm chain X
6lsr chain X
6lss chain X
6lu8 chain X
6ole chain q
6olf chain q
6olg chain Ap
6oli chain q
6olz chain Ap
6om0 chain q
6om7 chain q
6qzp chain Lp
6w6l chain q
6xa1 chain Lp
6y0g chain Lp
6y2l chain Lp
6y57 chain Lp
6y6x chain Lp
6z6l chain Lp
6z6m chain Lp
6z6n chain Lp
6zm7 chain Lp
6zme chain Lp
6zmi chain Lp
6zmo chain Lp
7bhp chain Lp
7f5s chain Lp
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S21 YGTRYGAS LRKMVKK 1 41 - - 21 20 - - - - - - - - - - - - - - - - S40 QHAKYTCS FCGKTKM 2 33 - - - - - - - - - - - - - - - - 15 6 12 -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S21 YGTRYGAS LRKMVKK 0.16 - 0.16 - - - - - - - - S40 QHAKYTCS FCGKTKM - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S21
S40
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S21 S40 protein RNA SCNV methylation CCRCC S21 S40 protein RNA SCNV methylation COAD S21 S40 protein RNA SCNV methylation GBM S21 S40 protein RNA SCNV methylation HNSCC S21 S40 protein RNA SCNV methylation LSCC S21 S40 protein RNA SCNV methylation LUAD S21 S40 protein RNA SCNV methylation OV S21 S40 protein RNA SCNV methylation PDAC S21 S40 protein RNA SCNV methylation UCEC S21 S40 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S21
S40
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S21
S40
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.