PALLD: palladin, cytoskeletal associated protein
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S35 PGLSAFLS QEEINKS 2 129 - - - - - - - - 76 44 - - 5 4 - - - - - - T100 RPQDNRST PVQPLAE 1 8 - - - - - - - - 4 4 - - - - - - - - - - S115 KQTKSISS PVSKRKP 2 110 - - - - - - - - 63 38 5 4 - - - - - - - - S192 AAKPRNRS PNGESSS 1 9 - - - - - - - - - - 5 4 - - - - - - - - S206 SPDSGYLS PKNQPSA 1 9 - - - - - - - - 5 4 - - - - - - - - - - S392 QAQKKTTS VSLTIGS 1 12 - - - - - - - - - - - - - - - - - - 12 - S394 QKKTTSVS LTIGSSS 1 14 - - - - - - - - - - - - - - - - - - 5 9 T396 KTTSVSLT IGSSSPK 1 9 9 - - - - - - - - - - - - - - - - - - - S399 SVSLTIGS SSPKTGV 2 73 48 - 13 12 - - - - - - - - - - - - - - - - S400 VSLTIGSS SPKTGVT 4 68 24 - 8 8 - - - - 6 3 10 9 - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S35 PGLSAFLS QEEINKS -1.4e-3 - - - - -1.4e-3 - - - - - T100 RPQDNRST PVQPLAE - - - - - - - - - - - S115 KQTKSISS PVSKRKP -0.14 - - - - -0.14 - - - - - S192 AAKPRNRS PNGESSS - - - - - - - - - - - S206 SPDSGYLS PKNQPSA - - - - - - - - - - - S392 QAQKKTTS VSLTIGS - - - - - - - - - - - S394 QKKTTSVS LTIGSSS - - - - - - - - - - - T396 KTTSVSLT IGSSSPK - - - - - - - - - - - S399 SVSLTIGS SSPKTGV - - - - - - - - - - - S400 VSLTIGSS SPKTGVT - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S35
T100
S115
S192
S206
S392
S394
T396
S399
S400
S401
S415
S423
T434
T436
Y438
S479
S582
S595
S632
T635
S641
S669
S756
S763
S772
S777
Y783
Y803
S835
S838
S894
S897
S899
S909
S911
S914
T956
S972
S1066
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S35 T100 S115 S192 S206 S392 S394 T396 S399 S400 S401 S415 S423 T434 T436 Y438 S479 S582 S595 S632 T635 S641 S669 S756 S763 S772 S777 Y783 Y803 S835 S838 S894 S897 S899 S909 S911 S914 T956 S972 S1066 protein RNA SCNV methylation CCRCC S35 T100 S115 S192 S206 S392 S394 T396 S399 S400 S401 S415 S423 T434 T436 Y438 S479 S582 S595 S632 T635 S641 S669 S756 S763 S772 S777 Y783 Y803 S835 S838 S894 S897 S899 S909 S911 S914 T956 S972 S1066 protein RNA SCNV methylation COAD S35 T100 S115 S192 S206 S392 S394 T396 S399 S400 S401 S415 S423 T434 T436 Y438 S479 S582 S595 S632 T635 S641 S669 S756 S763 S772 S777 Y783 Y803 S835 S838 S894 S897 S899 S909 S911 S914 T956 S972 S1066 protein RNA SCNV methylation GBM S35 T100 S115 S192 S206 S392 S394 T396 S399 S400 S401 S415 S423 T434 T436 Y438 S479 S582 S595 S632 T635 S641 S669 S756 S763 S772 S777 Y783 Y803 S835 S838 S894 S897 S899 S909 S911 S914 T956 S972 S1066 protein RNA SCNV methylation HNSCC S35 T100 S115 S192 S206 S392 S394 T396 S399 S400 S401 S415 S423 T434 T436 Y438 S479 S582 S595 S632 T635 S641 S669 S756 S763 S772 S777 Y783 Y803 S835 S838 S894 S897 S899 S909 S911 S914 T956 S972 S1066 protein RNA SCNV methylation LSCC S35 T100 S115 S192 S206 S392 S394 T396 S399 S400 S401 S415 S423 T434 T436 Y438 S479 S582 S595 S632 T635 S641 S669 S756 S763 S772 S777 Y783 Y803 S835 S838 S894 S897 S899 S909 S911 S914 T956 S972 S1066 protein RNA SCNV methylation LUAD S35 T100 S115 S192 S206 S392 S394 T396 S399 S400 S401 S415 S423 T434 T436 Y438 S479 S582 S595 S632 T635 S641 S669 S756 S763 S772 S777 Y783 Y803 S835 S838 S894 S897 S899 S909 S911 S914 T956 S972 S1066 protein RNA SCNV methylation OV S35 T100 S115 S192 S206 S392 S394 T396 S399 S400 S401 S415 S423 T434 T436 Y438 S479 S582 S595 S632 T635 S641 S669 S756 S763 S772 S777 Y783 Y803 S835 S838 S894 S897 S899 S909 S911 S914 T956 S972 S1066 protein RNA SCNV methylation PDAC S35 T100 S115 S192 S206 S392 S394 T396 S399 S400 S401 S415 S423 T434 T436 Y438 S479 S582 S595 S632 T635 S641 S669 S756 S763 S772 S777 Y783 Y803 S835 S838 S894 S897 S899 S909 S911 S914 T956 S972 S1066 protein RNA SCNV methylation UCEC S35 T100 S115 S192 S206 S392 S394 T396 S399 S400 S401 S415 S423 T434 T436 Y438 S479 S582 S595 S632 T635 S641 S669 S756 S763 S772 S777 Y783 Y803 S835 S838 S894 S897 S899 S909 S911 S914 T956 S972 S1066 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S35
T100
S115
S192
S206
S392
S394
T396
S399
S400
S401
S415
S423
T434
T436
Y438
S479
S582
S595
S632
T635
S641
S669
S756
S763
S772
S777
Y783
Y803
S835
S838
S894
S897
S899
S909
S911
S914
T956
S972
S1066
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S35
T100
S115
S192
S206
S392
S394
T396
S399
S400
S401
S415
S423
T434
T436
Y438
S479
S582
S595
S632
T635
S641
S669
S756
S763
S772
S777
Y783
Y803
S835
S838
S894
S897
S899
S909
S911
S914
T956
S972
S1066
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.