- TCEA1:
- transcription elongation factor A1
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S57 | VNAIRKQSTDEEVTS | 6 | 239 | - | - | - | - | 9 | 9 | 63 | - | 5 | 3 | - | - | - | - | 44 | 9 | 22 | 8 | 60 | 7 |
S81 | KKLLDGPSTEKDLDE | 10 | 1394 | 104 | - | 103 | 80 | 60 | 46 | 90 | - | 103 | 59 | 103 | 95 | 110 | 101 | 67 | 17 | 101 | 42 | 95 | 18 |
S97 | KKEPAITSQNSPEAR | 8 | 235 | 9 | - | 9 | 8 | 17 | 10 | 10 | - | 12 | 6 | 63 | 58 | - | - | - | - | 17 | 8 | 5 | 3 |
S100 | PAITSQNSPEAREES | 10 | 1552 | 122 | - | 103 | 80 | 97 | 100 | 99 | - | 108 | 62 | 108 | 99 | 110 | 100 | 83 | 19 | 105 | 44 | 95 | 18 |
S107 | SPEAREESTSSGNVS | 2 | 34 | - | - | - | - | - | - | - | - | - | - | 10 | 9 | 8 | 7 | - | - | - | - | - | - |
S109 | EAREESTSSGNVSNR | 2 | 27 | - | - | - | - | - | - | - | - | - | - | 10 | 9 | 4 | 4 | - | - | - | - | - | - |
S114 | STSSGNVSNRKDETN | 4 | 41 | - | - | - | - | 4 | 5 | - | - | - | - | 10 | 10 | 4 | 4 | 4 | - | - | - | - | - |
S135 | SSFPRAPSTSDSVRL | 10 | 782 | 43 | - | 5 | 4 | 57 | 50 | 99 | - | 41 | 24 | 93 | 86 | 13 | 12 | 51 | 9 | 76 | 30 | 73 | 16 |
S137 | FPRAPSTSDSVRLKC | 2 | 21 | - | - | 8 | 7 | - | - | - | - | - | - | - | - | - | - | - | - | 4 | 2 | - | - |
S139 | RAPSTSDSVRLKCRE | 1 | 7 | 7 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S57 | VNAIRKQSTDEEVTS | - | - | - | - | - | - | - | - | - | - | - |
S81 | KKLLDGPSTEKDLDE | -0.016 | - | -0.018 | 3.9e-9 | - | -0.57 | -3.1e-21 | 0.044 | -6.6e-4 | 0.68 | 0.49 |
S97 | KKEPAITSQNSPEAR | 5.5e-12 | - | - | - | - | - | 5.5e-12 | - | - | - | - |
S100 | PAITSQNSPEAREES | 1.7e-22 | - | -1.2e-5 | 6.1e-12 | - | 1.6e-16 | 6.3e-16 | 1.2e-13 | -0.99 | -0.7 | 0.081 |
S107 | SPEAREESTSSGNVS | - | - | - | - | - | - | - | - | - | - | - |
S109 | EAREESTSSGNVSNR | - | - | - | - | - | - | - | - | - | - | - |
S114 | STSSGNVSNRKDETN | - | - | - | - | - | - | - | - | - | - | - |
S135 | SSFPRAPSTSDSVRL | 1.9e-19 | - | - | 8.9e-8 | - | 2.5e-3 | 1.2e-17 | - | - | 0.12 | 0.09 |
S137 | FPRAPSTSDSVRLKC | - | - | - | - | - | - | - | - | - | - | - |
S139 | RAPSTSDSVRLKCRE | - | - | - | - | - | - | - | - | - | - | - |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |