PTK2: protein tyrosine kinase 2
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1k04 chain A
1k05 chain A
1k05 chain B
1k05 chain C
1mp8 chain A
1ow6 chain A
1ow6 chain B
1ow6 chain C
1ow7 chain A
1ow7 chain B
1ow7 chain C
1ow8 chain A
1ow8 chain B
1ow8 chain C
2etm chain A
2etm chain B
2ijm chain A
2ijm chain B
3b71 chain A
3b71 chain B
3b71 chain C
3bz3 chain A
3pxk chain A
3pxk chain B
3s9o chain A
3s9o chain B
3s9o chain C
4ebv chain A
4ebw chain A
4gu6 chain A
4gu6 chain B
4gu9 chain A
4gu9 chain B
4i4e chain A
4i4f chain A
4k8a chain A
4k8a chain B
4k9y chain A
4kab chain A
4kab chain B
4kao chain A
4kao chain B
4ny0 chain A
4ny0 chain B
4ny0 chain C
4ny0 chain D
4q9s chain A
6i8z chain A
6les chain A
6les chain B
6les chain X
6les chain Y
6pw8 chain A
6yoj chain A
6yq1 chain A
6yq1 chain B
6yq1 chain C
6yq1 chain D
6yr9 chain A
6yr9 chain B
6yr9 chain C
6yr9 chain D
6yt6 chain A
6yt6 chain B
6yvs chain A
6yvs chain B
6yvs chain C
6yvs chain D
6yvy chain A
6yvy chain B
6yvy chain C
6yvy chain D
6yxv chain A
6yxv chain B
6yxv chain C
6yxv chain D
7pi4 chain DDD
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S29 LGTGMERS PGAMERV 7 773 - - 49 29 - - 99 - 95 55 83 75 82 78 - - 51 21 47 9 S54 SEPTTWAS IIRHGDA 1 9 - - - - - - 9 - - - - - - - - - - - - - S372 EGERALPS IPKLANS 5 221 - - 57 47 - - - - - - 19 18 31 27 - - 9 4 7 2 S390 GMRTHAVS VSETDDY 6 420 - - 21 20 - - 89 - 24 11 42 37 48 41 - - - - 69 18 S392 RTHAVSVS ETDDYAE 5 248 - - 39 27 - - - - 10 7 12 13 62 55 - - - - 14 9 T394 HAVSVSET DDYAEII 2 18 - - 5 4 - - - - - - - - 5 4 - - - - - - Y397 SVSETDDY AEIIDEE 6 637 - - 63 51 - - 54 - 72 44 81 74 63 61 - - - - 56 18 Y407 IIDEEDTY TMPSTRD 1 9 - - - - - - - - - - 5 4 - - - - - - - - Y441 GDVHQGIY MSPENPA 3 79 - - 13 12 - - - - - - 15 14 13 12 - - - - - - S461 KTCKNCTS DSVREKF 1 9 - - 5 4 - - - - - - - - - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S29 LGTGMERS PGAMERV -0.21 - 0.011 - - 5.8e-4 -0.37 -2.8e-4 - -2.0e-5 - S54 SEPTTWAS IIRHGDA - - - - - - - - - - - S372 EGERALPS IPKLANS -3.2e-13 - -9.2e-12 - - - - -4.9e-4 - - - S390 GMRTHAVS VSETDDY 0.27 - 0.18 - - 0.14 -0.18 0.15 - - -0.66 S392 RTHAVSVS ETDDYAE 0.052 - 0.01 - - - - 0.85 - - - T394 HAVSVSET DDYAEII - - - - - - - - - - - Y397 SVSETDDY AEIIDEE -1.6e-16 - -4.6e-5 - - -0.15 -2.5e-13 -2.8e-7 - - -0.63 Y407 IIDEEDTY TMPSTRD - - - - - - - - - - - Y441 GDVHQGIY MSPENPA - - - - - - - - - - - S461 KTCKNCTS DSVREKF - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S29
S54
S372
S390
S392
T394
Y397
Y407
Y441
S461
Y570
S574
Y576
Y577
S702
S705
S708
S716
Y720
S722
S840
S843
S850
Y861
S887
S890
S892
S893
S910
Y925
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S29 S54 S372 S390 S392 T394 Y397 Y407 Y441 S461 Y570 S574 Y576 Y577 S702 S705 S708 S716 Y720 S722 S840 S843 S850 Y861 S887 S890 S892 S893 S910 Y925 protein RNA SCNV methylation CCRCC S29 S54 S372 S390 S392 T394 Y397 Y407 Y441 S461 Y570 S574 Y576 Y577 S702 S705 S708 S716 Y720 S722 S840 S843 S850 Y861 S887 S890 S892 S893 S910 Y925 protein RNA SCNV methylation COAD S29 S54 S372 S390 S392 T394 Y397 Y407 Y441 S461 Y570 S574 Y576 Y577 S702 S705 S708 S716 Y720 S722 S840 S843 S850 Y861 S887 S890 S892 S893 S910 Y925 protein RNA SCNV methylation GBM S29 S54 S372 S390 S392 T394 Y397 Y407 Y441 S461 Y570 S574 Y576 Y577 S702 S705 S708 S716 Y720 S722 S840 S843 S850 Y861 S887 S890 S892 S893 S910 Y925 protein RNA SCNV methylation HNSCC S29 S54 S372 S390 S392 T394 Y397 Y407 Y441 S461 Y570 S574 Y576 Y577 S702 S705 S708 S716 Y720 S722 S840 S843 S850 Y861 S887 S890 S892 S893 S910 Y925 protein RNA SCNV methylation LSCC S29 S54 S372 S390 S392 T394 Y397 Y407 Y441 S461 Y570 S574 Y576 Y577 S702 S705 S708 S716 Y720 S722 S840 S843 S850 Y861 S887 S890 S892 S893 S910 Y925 protein RNA SCNV methylation LUAD S29 S54 S372 S390 S392 T394 Y397 Y407 Y441 S461 Y570 S574 Y576 Y577 S702 S705 S708 S716 Y720 S722 S840 S843 S850 Y861 S887 S890 S892 S893 S910 Y925 protein RNA SCNV methylation OV S29 S54 S372 S390 S392 T394 Y397 Y407 Y441 S461 Y570 S574 Y576 Y577 S702 S705 S708 S716 Y720 S722 S840 S843 S850 Y861 S887 S890 S892 S893 S910 Y925 protein RNA SCNV methylation PDAC S29 S54 S372 S390 S392 T394 Y397 Y407 Y441 S461 Y570 S574 Y576 Y577 S702 S705 S708 S716 Y720 S722 S840 S843 S850 Y861 S887 S890 S892 S893 S910 Y925 protein RNA SCNV methylation UCEC S29 S54 S372 S390 S392 T394 Y397 Y407 Y441 S461 Y570 S574 Y576 Y577 S702 S705 S708 S716 Y720 S722 S840 S843 S850 Y861 S887 S890 S892 S893 S910 Y925 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S29
S54
S372
S390
S392
T394
Y397
Y407
Y441
S461
Y570
S574
Y576
Y577
S702
S705
S708
S716
Y720
S722
S840
S843
S850
Y861
S887
S890
S892
S893
S910
Y925
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S29
S54
S372
S390
S392
T394
Y397
Y407
Y441
S461
Y570
S574
Y576
Y577
S702
S705
S708
S716
Y720
S722
S840
S843
S850
Y861
S887
S890
S892
S893
S910
Y925
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.