RIC8A:
RIC8 guanine nucleotide exchange factor A

Lollipop plot

Phosphosites location and occurrence

Loading...
Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

Loading, please wait
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S32YNQEHSQSFTFDDAQ254----3645-------------
Y435GGRPEGQYSEDEDTD9657--986335-10862787289821245421113
S436GRPEGQYSEDEDTDT9971--66529710099-59304440443942997409518
T441QYSEDEDTDTDEYKE91082--9168605673-89539890857614287358718
T443SEDEDTDTDEYKEAK8501--2017343864-13629254340--62266816
S502VIQPMGMSPRGHLTS91351--10380647099-1025910899106978319105449518
T517LQDAMCETMEQQLSS343------18-5398--------
S523ETMEQQLSSDPDSDP18------------------53
S524TMEQQLSSDPDSDPD18------------------53
S528QLSSDPDSDPD____5242------89-5334303228----192
Showing 1 to 10 of 10 rows

Tumor and normal comparison

Loading, please wait
Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S32YNQEHSQSFTFDDAQ-----------
Y435GGRPEGQYSEDEDTD-0.078-----0.67-0.0150.44--0.15-
S436GRPEGQYSEDEDTDT2.8e-11--0.36.3e-6-5.6e-45.4e-54.6e-4-0.560.011
T441QYSEDEDTDTDEYKE6.3e-31--3.7e-81.1e-5-1.2e-141.1e-197.5e-17-0.0115.9e-5
T443SEDEDTDTDEYKEAK0.028-1.2e-40.37--3.7e-60.075--5.8e-3-2.6e-3
S502VIQPMGMSPRGHLTS2.8e-14-4.2e-200.63-3.7e-72.9e-51.2e-110.38-1.4e-90.32
T517LQDAMCETMEQQLSS-----------
S523ETMEQQLSSDPDSDP-----------
S524TMEQQLSSDPDSDPD-----------
S528QLSSDPDSDPD____-0.56-----0.95-0.37---
Showing 1 to 10 of 10 rows

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

Loading, please wait
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS32Y435S436T441T443S502T517S523S524S528proteinRNASCNVmethylationCCRCCS32Y435S436T441T443S502T517S523S524S528proteinRNASCNVmethylationCOADS32Y435S436T441T443S502T517S523S524S528proteinRNASCNVmethylationGBMS32Y435S436T441T443S502T517S523S524S528proteinRNASCNVmethylationHNSCCS32Y435S436T441T443S502T517S523S524S528proteinRNASCNVmethylationLSCCS32Y435S436T441T443S502T517S523S524S528proteinRNASCNVmethylationLUADS32Y435S436T441T443S502T517S523S524S528proteinRNASCNVmethylationOVS32Y435S436T441T443S502T517S523S524S528proteinRNASCNVmethylationPDACS32Y435S436T441T443S502T517S523S524S528proteinRNASCNVmethylationUCECS32Y435S436T441T443S502T517S523S524S528proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

Loading, please wait
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

Loading, please wait
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.