Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1bmq chain A
1bmq chain B
1ibc chain A
1ibc chain B
1ice chain A
1ice chain B
1rwk chain A
1rwk chain B
1rwm chain A
1rwm chain B
1rwn chain A
1rwn chain B
1rwo chain A
1rwo chain B
1rwp chain A
1rwp chain B
1rwv chain A
1rwv chain B
1rww chain A
1rww chain B
1rwx chain A
1rwx chain B
1sc1 chain A
1sc1 chain B
1sc3 chain A
1sc3 chain B
1sc4 chain A
1sc4 chain B
2fqq chain A
2fqq chain B
2h48 chain A
2h48 chain B
2h4w chain A
2h4w chain B
2h4y chain A
2h4y chain B
2h51 chain A
2h51 chain B
2h54 chain A
2h54 chain B
2hbq chain A
2hbq chain B
2hbr chain A
2hbr chain B
2hby chain A
2hby chain B
2hbz chain A
2hbz chain B
3d6f chain A
3d6f chain B
3d6h chain A
3d6h chain B
3d6m chain A
3d6m chain B
3e4c chain A
3e4c chain B
3ns7 chain A
3ns7 chain B
5fna chain A
5fna chain B
5fna chain C
5fna chain D
5fna chain E
5fna chain F
5fna chain G
5fna chain H
5mmv chain A
5mmv chain B
5mtk chain A
5mtk chain B
6bz9 chain A
6bz9 chain B
6f6r chain A
6f6r chain B
6kn0 chain A
6kn0 chain B
6kn0 chain C
6kn0 chain D
6pzp chain A
6pzp chain B
6vie chain A
6vie chain B
7keu chain E
7keu chain F
7keu chain G
7keu chain H
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S149 QRIWKQKS AEIYPIM 5 194 - - - - - - 44 - 11 6 10 9 43 40 - - - - 24 7 S289 IQACRGDS PGVVWFK 2 128 - - - - - - - - 16 10 53 49 - - - - - - - - S302 FKDSVGVS GNLSLPT 1 9 - - - - - - - - - - - - 5 4 - - - - - - S306 VGVSGNLS LPTTEEF 6 432 47 - 16 8 - - - - 50 31 69 65 69 65 - - 9 3 - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S149 QRIWKQKS AEIYPIM -0.022 - - - - - - -0.022 - - - S289 IQACRGDS PGVVWFK -9.9e-3 - - - - - -9.9e-3 - - - - S302 FKDSVGVS GNLSLPT - - - - - - - - - - - S306 VGVSGNLS LPTTEEF -1.2e-8 - - - - 0.025 -3.7e-9 -5.6e-10 - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S149
S289
S302
S306
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S149 S289 S302 S306 protein RNA SCNV methylation CCRCC S149 S289 S302 S306 protein RNA SCNV methylation COAD S149 S289 S302 S306 protein RNA SCNV methylation GBM S149 S289 S302 S306 protein RNA SCNV methylation HNSCC S149 S289 S302 S306 protein RNA SCNV methylation LSCC S149 S289 S302 S306 protein RNA SCNV methylation LUAD S149 S289 S302 S306 protein RNA SCNV methylation OV S149 S289 S302 S306 protein RNA SCNV methylation PDAC S149 S289 S302 S306 protein RNA SCNV methylation UCEC S149 S289 S302 S306 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S149
S289
S302
S306
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S149
S289
S302
S306
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.