- H2AX:
- H2A.X variant histone
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
T121 | AVLLPKKTSATVGPK | 8 | 255 | 6 | - | 12 | 12 | - | - | 18 | - | 5 | 3 | 64 | 58 | 14 | 11 | 27 | 7 | 13 | 5 | - | - |
S122 | VLLPKKTSATVGPKA | 10 | 569 | 9 | - | 4 | 4 | 7 | 2 | 90 | - | 40 | 22 | 35 | 34 | 12 | 11 | 83 | 18 | 79 | 33 | 77 | 9 |
T124 | LPKKTSATVGPKAPS | 2 | 25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5 | 2 | 15 | 3 |
T137 | PSGGKKATQASQEY_ | 6 | 219 | - | - | 4 | 4 | 11 | 7 | - | - | - | - | 68 | 57 | 9 | 8 | 7 | 1 | - | - | 30 | 13 |
S140 | GKKATQASQEY____ | 10 | 1512 | 122 | - | 95 | 72 | 97 | 99 | 99 | - | 108 | 62 | 108 | 99 | 110 | 101 | 72 | 17 | 101 | 43 | 89 | 18 |
Y143 | ATQASQEY_______ | 10 | 1257 | 113 | - | 95 | 71 | 50 | 48 | 90 | - | 84 | 50 | 98 | 89 | 105 | 97 | 40 | 11 | 91 | 38 | 74 | 13 |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
T121 | AVLLPKKTSATVGPK | -7.6e-17 | - | - | - | - | - | -7.5e-17 | - | - | - | - |
S122 | VLLPKKTSATVGPKA | 2.3e-15 | - | - | - | - | 5.4e-6 | 6.6e-11 | - | 4.6e-5 | 0.49 | - |
T124 | LPKKTSATVGPKAPS | - | - | - | - | - | - | - | - | - | - | - |
T137 | PSGGKKATQASQEY_ | 2.5e-6 | - | - | - | - | - | 4.7e-10 | - | - | - | 0.67 |
S140 | GKKATQASQEY____ | 1e-39 | - | 8.9e-16 | 3.9e-22 | - | 1.2e-8 | 8.2e-22 | 1.0e-6 | -0.77 | -0.24 | 0.38 |
Y143 | ATQASQEY_______ | 1.8e-35 | - | 1.1e-15 | 5e-15 | - | 2.6e-9 | 1.1e-15 | -0.12 | 0.13 | 2.3e-11 | -0.19 |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |