SOD2: superoxide dismutase 2
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1ap5 chain A
1ap5 chain B
1ap6 chain A
1ap6 chain B
1em1 chain A
1em1 chain B
1ja8 chain A
1ja8 chain B
1luv chain A
1luv chain B
1luw chain A
1luw chain B
1msd chain A
1msd chain B
1n0j chain A
1n0j chain B
1n0n chain A
1n0n chain B
1pl4 chain A
1pl4 chain B
1pl4 chain C
1pl4 chain D
1pm9 chain A
1pm9 chain B
1qnm chain A
1qnm chain B
1szx chain A
1szx chain B
1var chain A
1var chain B
1xdc chain A
1xdc chain B
1xil chain A
1xil chain B
1zsp chain A
1zsp chain B
1zte chain A
1zte chain B
1zte chain C
1zte chain D
1zuq chain A
1zuq chain B
2adp chain A
2adq chain B
2gds chain A
2gds chain B
2gds chain C
2gds chain D
2p4k chain A
2p4k chain B
2p4k chain C
2p4k chain D
2qka chain A
2qka chain C
2qkc chain A
2qkc chain C
3c3s chain A
3c3s chain B
3c3t chain A
3c3t chain B
5gxo chain A
5gxo chain B
5t30 chain A
5t30 chain B
5vf9 chain A
5vf9 chain B
7kks chain A
7kks chain B
7kku chain A
7kku chain B
7kkw chain A
7kkw chain B
7klb chain A
7klb chain B
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T9 LSRAVCGT SRQLAPV 1 16 - - - - - - - - - - - - - - - - - - 16 - S10 SRAVCGTS RQLAPVL 1 9 - - - - - - 9 - - - - - - - - - - - - - S52 QIMQLHHS KHHAAYV 1 10 - - - - - - 10 - - - - - - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
T9 LSRAVCGT SRQLAPV - - - - - - - - - - - S10 SRAVCGTS RQLAPVL - - - - - - - - - - - S52 QIMQLHHS KHHAAYV - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
T9
S10
S52
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA T9 S10 S52 protein RNA SCNV methylation CCRCC T9 S10 S52 protein RNA SCNV methylation COAD T9 S10 S52 protein RNA SCNV methylation GBM T9 S10 S52 protein RNA SCNV methylation HNSCC T9 S10 S52 protein RNA SCNV methylation LSCC T9 S10 S52 protein RNA SCNV methylation LUAD T9 S10 S52 protein RNA SCNV methylation OV T9 S10 S52 protein RNA SCNV methylation PDAC T9 S10 S52 protein RNA SCNV methylation UCEC T9 S10 S52 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
T9
S10
S52
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
T9
S10
S52
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.