NR1H4: nuclear receptor subfamily 1 group H member 4
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1osh chain A
3bej chain A
3bej chain B
3dct chain A
3dcu chain A
3fli chain A
3fxv chain A
3gd2 chain A
3hc5 chain A
3hc6 chain A
3l1b chain A
3okh chain A
3oki chain A
3oki chain C
3olf chain A
3olf chain C
3omk chain A
3omk chain C
3omm chain A
3omm chain C
3oof chain A
3oof chain C
3ook chain A
3ook chain C
3p88 chain A
3p89 chain A
3rut chain A
3ruu chain A
3rvf chain A
4oiv chain A
4oiv chain B
4qe6 chain A
4qe8 chain A
4qe8 chain B
4wvd chain A
4wvd chain B
5iaw chain A
5iaw chain B
5ick chain A
5ick chain B
5q0i chain A
5q0j chain A
5q0j chain C
5q0k chain A
5q0l chain A
5q0l chain C
5q0m chain A
5q0n chain A
5q0n chain C
5q0o chain A
5q0o chain C
5q0p chain A
5q0p chain C
5q0q chain A
5q0q chain C
5q0r chain A
5q0s chain A
5q0s chain C
5q0t chain A
5q0u chain A
5q0u chain C
5q0v chain A
5q0v chain C
5q0w chain A
5q0x chain A
5q0y chain A
5q0y chain C
5q0z chain A
5q0z chain C
5q10 chain A
5q11 chain A
5q12 chain A
5q13 chain A
5q13 chain C
5q14 chain A
5q14 chain C
5q15 chain A
5q15 chain C
5q16 chain A
5q16 chain C
5q17 chain A
5q18 chain A
5q18 chain C
5q19 chain A
5q19 chain C
5q1a chain A
5q1a chain C
5q1b chain A
5q1b chain C
5q1c chain A
5q1c chain C
5q1d chain A
5q1d chain C
5q1e chain A
5q1f chain A
5q1f chain C
5q1g chain A
5q1h chain A
5q1h chain C
5q1h chain E
5q1h chain G
5q1i chain A
5wzx chain A
5wzx chain B
5y1j chain A
5y44 chain A
5y49 chain A
5y49 chain B
5yxb chain A
5yxd chain A
5yxj chain A
5yxj chain B
5yxl chain A
5yxl chain C
5z12 chain A
5z12 chain D
6a5w chain A
6a5w chain C
6a5x chain A
6a5y chain A
6a5z chain A
6a5z chain H
6a60 chain A
6hl0 chain A
6hl1 chain A
6itm chain A
6itm chain C
7d42 chain A
7trb chain A
7trb chain B
7vue chain A
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S238 DQTVNEDS EGRDLRQ 1 119 - - 66 53 - - - - - - - - - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S238 DQTVNEDS EGRDLRQ 2.6e-11 - 2.6e-11 - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S238
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S238 protein RNA SCNV methylation CCRCC S238 protein RNA SCNV methylation COAD S238 protein RNA SCNV methylation GBM S238 protein RNA SCNV methylation HNSCC S238 protein RNA SCNV methylation LSCC S238 protein RNA SCNV methylation LUAD S238 protein RNA SCNV methylation OV S238 protein RNA SCNV methylation PDAC S238 protein RNA SCNV methylation UCEC S238 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S238
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S238
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.