LDLR: low density lipoprotein receptor
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1ajj chain A
1d2j chain A
1f5y chain A
1f8z chain A
1hj7 chain A
1hz8 chain A
1i0u chain A
1ijq chain A
1ijq chain B
1ldl chain A
1ldr chain A
1n7d chain A
1xfe chain A
2fcw chain B
2kri chain B
2lgp chain A
2m7p chain A
2mg9 chain A
2w2m chain E
2w2n chain E
2w2o chain E
2w2p chain E
2w2q chain E
3bps chain E
3gcw chain E
3gcx chain E
3m0c chain C
3p5b chain L
3p5c chain L
3so6 chain Q
4ne9 chain D
5oy9 chain D
5oyl chain D
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S820 WRLKNINS INFDNPV 1 9 - - - - - - - - - - 5 4 - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S820 WRLKNINS INFDNPV - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S820
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S820 protein RNA SCNV methylation CCRCC S820 protein RNA SCNV methylation COAD S820 protein RNA SCNV methylation GBM S820 protein RNA SCNV methylation HNSCC S820 protein RNA SCNV methylation LSCC S820 protein RNA SCNV methylation LUAD S820 protein RNA SCNV methylation OV S820 protein RNA SCNV methylation PDAC S820 protein RNA SCNV methylation UCEC S820 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S820
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S820
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.