GFAP: glial fibrillary acidic protein
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
6a9p chain A
6a9p chain B
6a9p chain C
6a9p chain D
6a9p chain E
6a9p chain F
6a9p chain G
6a9p chain H
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T7 _MERRRIT SAARRSY 1 99 - - - - - - 99 - - - - - - - - - - - - - S8 MERRRITS AARRSYV 1 63 - - - - - - 63 - - - - - - - - - - - - - S13 ITSAARRS YVSSGEM 2 107 - - - - - - 99 - 5 3 - - - - - - - - - - Y14 TSAARRSY VSSGEMM 1 73 - - - - - - 73 - - - - - - - - - - - - - S16 AARRSYVS SGEMMVG 1 99 - - - - - - 99 - - - - - - - - - - - - - S17 ARRSYVSS GEMMVGG 1 99 - - - - - - 99 - - - - - - - - - - - - - S38 LGPGTRLS LARMPPP 4 130 - - - - - - 99 - 5 3 - - - - 6 2 - - 13 2 S53 LPTRVDFS LAGALNA 1 54 - - - - - - 54 - - - - - - - - - - - - - T65 LNAGFKET RASERAE 1 19 - - - - - - 19 - - - - - - - - - - - - - S68 GFKETRAS ERAEMME 1 54 - - - - - - 54 - - - - - - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
T7 _MERRRIT SAARRSY - - - - - - - - - - - S8 MERRRITS AARRSYV - - - - - - - - - - - S13 ITSAARRS YVSSGEM - - - - - - - - - - - Y14 TSAARRSY VSSGEMM - - - - - - - - - - - S16 AARRSYVS SGEMMVG - - - - - - - - - - - S17 ARRSYVSS GEMMVGG - - - - - - - - - - - S38 LGPGTRLS LARMPPP - - - - - - - - - - - S53 LPTRVDFS LAGALNA - - - - - - - - - - - T65 LNAGFKET RASERAE - - - - - - - - - - - S68 GFKETRAS ERAEMME - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
T7
S8
S13
Y14
S16
S17
S38
S53
T65
S68
S82
Y83
T131
S134
T150
Y172
S192
T232
T240
S247
S248
S259
T265
Y285
S291
T293
S298
T302
S305
S323
Y324
S337
Y349
T378
T383
S385
T392
S393
T396
S398
S400
T412
S424
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA T7 S8 S13 Y14 S16 S17 S38 S53 T65 S68 S82 Y83 T131 S134 T150 Y172 S192 T232 T240 S247 S248 S259 T265 Y285 S291 T293 S298 T302 S305 S323 Y324 S337 Y349 T378 T383 S385 T392 S393 T396 S398 S400 T412 S424 protein RNA SCNV methylation CCRCC T7 S8 S13 Y14 S16 S17 S38 S53 T65 S68 S82 Y83 T131 S134 T150 Y172 S192 T232 T240 S247 S248 S259 T265 Y285 S291 T293 S298 T302 S305 S323 Y324 S337 Y349 T378 T383 S385 T392 S393 T396 S398 S400 T412 S424 protein RNA SCNV methylation COAD T7 S8 S13 Y14 S16 S17 S38 S53 T65 S68 S82 Y83 T131 S134 T150 Y172 S192 T232 T240 S247 S248 S259 T265 Y285 S291 T293 S298 T302 S305 S323 Y324 S337 Y349 T378 T383 S385 T392 S393 T396 S398 S400 T412 S424 protein RNA SCNV methylation GBM T7 S8 S13 Y14 S16 S17 S38 S53 T65 S68 S82 Y83 T131 S134 T150 Y172 S192 T232 T240 S247 S248 S259 T265 Y285 S291 T293 S298 T302 S305 S323 Y324 S337 Y349 T378 T383 S385 T392 S393 T396 S398 S400 T412 S424 protein RNA SCNV methylation HNSCC T7 S8 S13 Y14 S16 S17 S38 S53 T65 S68 S82 Y83 T131 S134 T150 Y172 S192 T232 T240 S247 S248 S259 T265 Y285 S291 T293 S298 T302 S305 S323 Y324 S337 Y349 T378 T383 S385 T392 S393 T396 S398 S400 T412 S424 protein RNA SCNV methylation LSCC T7 S8 S13 Y14 S16 S17 S38 S53 T65 S68 S82 Y83 T131 S134 T150 Y172 S192 T232 T240 S247 S248 S259 T265 Y285 S291 T293 S298 T302 S305 S323 Y324 S337 Y349 T378 T383 S385 T392 S393 T396 S398 S400 T412 S424 protein RNA SCNV methylation LUAD T7 S8 S13 Y14 S16 S17 S38 S53 T65 S68 S82 Y83 T131 S134 T150 Y172 S192 T232 T240 S247 S248 S259 T265 Y285 S291 T293 S298 T302 S305 S323 Y324 S337 Y349 T378 T383 S385 T392 S393 T396 S398 S400 T412 S424 protein RNA SCNV methylation OV T7 S8 S13 Y14 S16 S17 S38 S53 T65 S68 S82 Y83 T131 S134 T150 Y172 S192 T232 T240 S247 S248 S259 T265 Y285 S291 T293 S298 T302 S305 S323 Y324 S337 Y349 T378 T383 S385 T392 S393 T396 S398 S400 T412 S424 protein RNA SCNV methylation PDAC T7 S8 S13 Y14 S16 S17 S38 S53 T65 S68 S82 Y83 T131 S134 T150 Y172 S192 T232 T240 S247 S248 S259 T265 Y285 S291 T293 S298 T302 S305 S323 Y324 S337 Y349 T378 T383 S385 T392 S393 T396 S398 S400 T412 S424 protein RNA SCNV methylation UCEC T7 S8 S13 Y14 S16 S17 S38 S53 T65 S68 S82 Y83 T131 S134 T150 Y172 S192 T232 T240 S247 S248 S259 T265 Y285 S291 T293 S298 T302 S305 S323 Y324 S337 Y349 T378 T383 S385 T392 S393 T396 S398 S400 T412 S424 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
T7
S8
S13
Y14
S16
S17
S38
S53
T65
S68
S82
Y83
T131
S134
T150
Y172
S192
T232
T240
S247
S248
S259
T265
Y285
S291
T293
S298
T302
S305
S323
Y324
S337
Y349
T378
T383
S385
T392
S393
T396
S398
S400
T412
S424
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
T7
S8
S13
Y14
S16
S17
S38
S53
T65
S68
S82
Y83
T131
S134
T150
Y172
S192
T232
T240
S247
S248
S259
T265
Y285
S291
T293
S298
T302
S305
S323
Y324
S337
Y349
T378
T383
S385
T392
S393
T396
S398
S400
T412
S424
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.