Protein: ENSP00000482968
Gene: ALMS1

LinkedOmicsKB © 2022-2023 Zhang Lab

ALMS1:
ALMS1 centrosome and basal body associated protein

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S67YGPQHLESIDDEEDE127------27-------------
S92GRILPPLSPPQHRYS977157-7758--72-1783532101938219948918
S105YSEGERTSLEKIVPL2147-----------------7-
S154GDDQKTESWHCLPQE561--44--9---141354----53
S189TEVTDFPSLEEGILT1099621-9168252017-9253898311010112493396018
S393DHFDAARSYGQYWTQ225------------44----125
S464DLRMLRMSPDTVPKA857215-----73-54303937403529675328918
S576TVLSSSHSHRGKPSI18--------------71----
S862STSSASSSLGEKPSA16------------------6-
S972YQQELPDSDLPRESL352--168------10954------
Showing 1 to 10 of 59 rows
102550100
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S67YGPQHLESIDDEEDE-----------
S92GRILPPLSPPQHRYS5.4e-3-0.025---0.44-0.520.4-2.8e-3
S105YSEGERTSLEKIVPL-----------
S154GDDQKTESWHCLPQE-----------
S189TEVTDFPSLEEGILT0.5--0.930.5--0.160.21-0.017-0.0640.055
S393DHFDAARSYGQYWTQ-----------
S464DLRMLRMSPDTVPKA0.33----6.9e-40.550.19--4.1e-3-0.81
S576TVLSSSHSHRGKPSI-----------
S862STSSASSSLGEKPSA-----------
S972YQQELPDSDLPRESL-----------
Showing 1 to 10 of 59 rows
102550100
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS67S92S105S154S189S393S464S576S862S972S1002S1030S1209S1219S1499S1530S1532S1635S1680S1857S2101S2141S2361S2466S2468S2474S2492S2632S2652S2770S2795S2805S2820T2873S2947S2962S2965T3036S3056S3070S3094S3113S3122S3131S3163S3208S3475S3479S3781T3911S3914S3915S3923T3926S3927S3929S3955proteinRNASCNVmethylationCCRCCS67S92S105S154S189S393S464S576S862S972S1002S1030S1209S1219S1499S1530S1532S1635S1680S1857S2101S2141S2361S2466S2468S2474S2492S2632S2652S2770S2795S2805S2820T2873S2947S2962S2965T3036S3056S3070S3094S3113S3122S3131S3163S3208S3475S3479S3781T3911S3914S3915S3923T3926S3927S3929S3955proteinRNASCNVmethylationCOADS67S92S105S154S189S393S464S576S862S972S1002S1030S1209S1219S1499S1530S1532S1635S1680S1857S2101S2141S2361S2466S2468S2474S2492S2632S2652S2770S2795S2805S2820T2873S2947S2962S2965T3036S3056S3070S3094S3113S3122S3131S3163S3208S3475S3479S3781T3911S3914S3915S3923T3926S3927S3929S3955proteinRNASCNVmethylationGBMS67S92S105S154S189S393S464S576S862S972S1002S1030S1209S1219S1499S1530S1532S1635S1680S1857S2101S2141S2361S2466S2468S2474S2492S2632S2652S2770S2795S2805S2820T2873S2947S2962S2965T3036S3056S3070S3094S3113S3122S3131S3163S3208S3475S3479S3781T3911S3914S3915S3923T3926S3927S3929S3955proteinRNASCNVmethylationHNSCCS67S92S105S154S189S393S464S576S862S972S1002S1030S1209S1219S1499S1530S1532S1635S1680S1857S2101S2141S2361S2466S2468S2474S2492S2632S2652S2770S2795S2805S2820T2873S2947S2962S2965T3036S3056S3070S3094S3113S3122S3131S3163S3208S3475S3479S3781T3911S3914S3915S3923T3926S3927S3929S3955proteinRNASCNVmethylationLSCCS67S92S105S154S189S393S464S576S862S972S1002S1030S1209S1219S1499S1530S1532S1635S1680S1857S2101S2141S2361S2466S2468S2474S2492S2632S2652S2770S2795S2805S2820T2873S2947S2962S2965T3036S3056S3070S3094S3113S3122S3131S3163S3208S3475S3479S3781T3911S3914S3915S3923T3926S3927S3929S3955proteinRNASCNVmethylationLUADS67S92S105S154S189S393S464S576S862S972S1002S1030S1209S1219S1499S1530S1532S1635S1680S1857S2101S2141S2361S2466S2468S2474S2492S2632S2652S2770S2795S2805S2820T2873S2947S2962S2965T3036S3056S3070S3094S3113S3122S3131S3163S3208S3475S3479S3781T3911S3914S3915S3923T3926S3927S3929S3955proteinRNASCNVmethylationOVS67S92S105S154S189S393S464S576S862S972S1002S1030S1209S1219S1499S1530S1532S1635S1680S1857S2101S2141S2361S2466S2468S2474S2492S2632S2652S2770S2795S2805S2820T2873S2947S2962S2965T3036S3056S3070S3094S3113S3122S3131S3163S3208S3475S3479S3781T3911S3914S3915S3923T3926S3927S3929S3955proteinRNASCNVmethylationPDACS67S92S105S154S189S393S464S576S862S972S1002S1030S1209S1219S1499S1530S1532S1635S1680S1857S2101S2141S2361S2466S2468S2474S2492S2632S2652S2770S2795S2805S2820T2873S2947S2962S2965T3036S3056S3070S3094S3113S3122S3131S3163S3208S3475S3479S3781T3911S3914S3915S3923T3926S3927S3929S3955proteinRNASCNVmethylationUCECS67S92S105S154S189S393S464S576S862S972S1002S1030S1209S1219S1499S1530S1532S1635S1680S1857S2101S2141S2361S2466S2468S2474S2492S2632S2652S2770S2795S2805S2820T2873S2947S2962S2965T3036S3056S3070S3094S3113S3122S3131S3163S3208S3475S3479S3781T3911S3914S3915S3923T3926S3927S3929S3955proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.