SAMHD1: SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
2e8o chain A
3u1n chain A
3u1n chain B
3u1n chain C
3u1n chain D
4bzb chain A
4bzb chain B
4bzb chain C
4bzb chain D
4bzc chain A
4bzc chain B
4bzc chain C
4bzc chain D
4cc9 chain C
4mz7 chain A
4mz7 chain B
4q7h chain A
4q7h chain B
4q7h chain C
4q7h chain D
4qfx chain A
4qfx chain B
4qfx chain C
4qfx chain D
4qfy chain A
4qfy chain B
4qfy chain C
4qfy chain D
4qfz chain A
4qfz chain B
4qfz chain C
4qfz chain D
4qg0 chain A
4qg0 chain B
4qg0 chain C
4qg0 chain D
4qg1 chain A
4qg1 chain B
4qg1 chain C
4qg1 chain D
4qg2 chain A
4qg2 chain B
4qg2 chain C
4qg2 chain D
4qg4 chain A
4qg4 chain B
4qg4 chain C
4qg4 chain D
4rxo chain A
4rxo chain B
4rxo chain C
4rxo chain D
4rxp chain A
4rxp chain B
4rxq chain A
4rxq chain B
4rxr chain A
4rxr chain B
4rxs chain A
4rxs chain B
4tnp chain A
4tnp chain B
4tnp chain C
4tnp chain D
4tnq chain A
4tnq chain B
4tnq chain C
4tnq chain D
4tnr chain A
4tnr chain B
4tnr chain C
4tnr chain D
4tnx chain A
4tnx chain B
4tnx chain C
4tnx chain D
4tny chain A
4tny chain B
4tny chain C
4tny chain D
4tnz chain A
4tnz chain B
4tnz chain C
4tnz chain D
4to0 chain A
4to0 chain B
4to0 chain C
4to0 chain D
4to1 chain A
4to1 chain B
4to1 chain C
4to1 chain D
4to2 chain A
4to2 chain B
4to2 chain C
4to2 chain D
4to3 chain A
4to3 chain B
4to3 chain C
4to3 chain D
4to4 chain A
4to4 chain B
4to4 chain C
4to4 chain D
4to5 chain A
4to5 chain B
4to5 chain C
4to5 chain D
4to6 chain A
4to6 chain B
4to6 chain C
4to6 chain D
4zwe chain A
4zwe chain B
4zwe chain C
4zwe chain D
4zwg chain A
4zwg chain B
4zwg chain C
4zwg chain D
5ao0 chain A
5ao0 chain B
5ao1 chain A
5ao1 chain B
5ao1 chain C
5ao1 chain D
5ao2 chain A
5ao2 chain B
5ao2 chain C
5ao2 chain D
5ao3 chain A
5ao3 chain B
5ao3 chain C
5ao3 chain D
5ao4 chain A
5ao4 chain B
5ao4 chain C
5ao4 chain D
6cm2 chain A
6cm2 chain B
6cm2 chain C
6cm2 chain D
6dw3 chain A
6dw3 chain B
6dw3 chain C
6dw3 chain D
6dw4 chain A
6dw4 chain B
6dw4 chain C
6dw4 chain D
6dw5 chain A
6dw5 chain B
6dw5 chain C
6dw5 chain D
6dw7 chain A
6dw7 chain B
6dw7 chain C
6dw7 chain D
6dwd chain A
6dwd chain B
6dwd chain C
6dwd chain D
6dwj chain A
6dwj chain B
6dwj chain C
6dwj chain D
6dwk chain A
6dwk chain B
6dwk chain C
6dwk chain D
6tx0 chain A
6tx0 chain B
6txa chain A
6txa chain B
6txa chain C
6txa chain D
6txa chain E
6txa chain F
6txa chain G
6txa chain H
6txa chain I
6txa chain J
6txa chain K
6txa chain L
6txa chain M
6txa chain N
6txa chain O
6txa chain P
6txc chain A
6txc chain B
6txc chain C
6txc chain D
6txc chain E
6txc chain F
6txc chain G
6txc chain H
6txc chain I
6txc chain J
6txc chain K
6txc chain L
6txc chain M
6txc chain N
6txc chain O
6txc chain P
6txe chain A
6txe chain B
6txe chain C
6txe chain D
6txe chain E
6txe chain F
6txe chain G
6txe chain H
6txe chain I
6txe chain J
6txe chain K
6txe chain L
6txe chain M
6txe chain N
6txe chain O
6txe chain P
6txf chain A
6txf chain B
6u6x chain A
6u6x chain B
6u6x chain C
6u6x chain D
6u6y chain A
6u6y chain B
6u6y chain C
6u6y chain D
6u6z chain A
6u6z chain B
6u6z chain C
6u6z chain D
6xu1 chain A
6xu1 chain B
6xu1 chain C
6xu1 chain D
6xu1 chain E
6xu1 chain F
6xu1 chain G
6xu1 chain H
6yom chain A
6yom chain B
7a5y chain A
7a5y chain B
7a5y chain C
7a5y chain D
7a5y chain E
7a5y chain F
7a5y chain G
7a5y chain H
7ltt chain A
7ltt chain B
7ltt chain C
7ltt chain D
7lu5 chain A
7lu5 chain B
7lu5 chain C
7lu5 chain D
7lu5 chain E
7lu5 chain F
7lu5 chain G
7lu5 chain H
7lu5 chain I
7lu5 chain J
7lu5 chain K
7lu5 chain L
7lu5 chain M
7lu5 chain N
7lu5 chain O
7lu5 chain P
7s2y chain A
7s2y chain B
7s2y chain C
7s2y chain D
7ujn chain A
7ujn chain B
7ujn chain C
7ujn chain D
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S6 __MQRADS EQPSKRP 6 233 - - - - - - 62 - 9 6 5 5 28 24 - - 3 2 71 18 S18 KRPRCDDS PRTPSNT 7 350 - - 5 4 - - 80 - 37 20 25 23 4 4 - - 45 19 66 18 T21 RCDDSPRT PSNTPSA 7 933 - - 32 29 - - 99 - 84 50 103 94 96 90 - - 105 44 89 18 S23 DDSPRTPS NTPSAEA 7 266 - - 16 - - - 35 - 24 13 5 4 48 45 - - 15 6 48 7 T25 SPRTPSNT PSAEADW 7 136 - - 20 11 - - 55 - 5 3 5 4 9 8 - - 4 1 11 - S27 RTPSNTPS AEADWSP 7 381 - - 12 10 - - 27 - 38 25 44 40 44 39 - - 5 2 77 18 S33 PSAEADWS PGLELHP 7 1123 - - 103 80 - - 99 - 108 62 108 99 105 97 - - 105 44 95 18 S52 WGPEQVCS FLRRGGF 1 10 - - - - - - - - - - 5 5 - - - - - - - - S93 FENLGVSS LGERKKL 4 55 - - - - - - - - 12 7 4 4 9 8 - - 7 4 - - S102 GERKKLLS YIQRLVQ 6 151 - - - - - - 9 - 5 3 29 27 15 12 - - 15 7 25 4
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S6 __MQRADS EQPSKRP -0.011 - - - - - - 0.28 - - -2.7e-6 S18 KRPRCDDS PRTPSNT 0.33 - - - - -0.82 -0.099 - - 0.019 0.14 T21 RCDDSPRT PSNTPSA -1.4e-15 - 0.028 - - -8.0e-5 -1.8e-24 -6e-18 - -0.36 0.054 S23 DDSPRTPS NTPSAEA -7.9e-4 - - - - -0.4 - -9.1e-5 - - - T25 SPRTPSNT PSAEADW 4.7e-3 - 4.7e-3 - - - - - - - - S27 RTPSNTPS AEADWSP -1.6e-6 - - - - 0.23 -3.5e-13 -2.5e-7 - - 0.11 S33 PSAEADWS PGLELHP 6.6e-14 - 6.4e-26 - - 0.046 0.67 -0.89 - 1.6e-7 0.77 S52 WGPEQVCS FLRRGGF - - - - - - - - - - - S93 FENLGVSS LGERKKL - - - - - - - - - - - S102 GERKKLLS YIQRLVQ -3.5e-6 - - - - - -3.5e-6 - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S6
S18
T21
S23
T25
S27
S33
S52
S93
S102
S278
S283
S295
S519
T592
S603
S616
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S6 S18 T21 S23 T25 S27 S33 S52 S93 S102 S278 S283 S295 S519 T592 S603 S616 protein RNA SCNV methylation CCRCC S6 S18 T21 S23 T25 S27 S33 S52 S93 S102 S278 S283 S295 S519 T592 S603 S616 protein RNA SCNV methylation COAD S6 S18 T21 S23 T25 S27 S33 S52 S93 S102 S278 S283 S295 S519 T592 S603 S616 protein RNA SCNV methylation GBM S6 S18 T21 S23 T25 S27 S33 S52 S93 S102 S278 S283 S295 S519 T592 S603 S616 protein RNA SCNV methylation HNSCC S6 S18 T21 S23 T25 S27 S33 S52 S93 S102 S278 S283 S295 S519 T592 S603 S616 protein RNA SCNV methylation LSCC S6 S18 T21 S23 T25 S27 S33 S52 S93 S102 S278 S283 S295 S519 T592 S603 S616 protein RNA SCNV methylation LUAD S6 S18 T21 S23 T25 S27 S33 S52 S93 S102 S278 S283 S295 S519 T592 S603 S616 protein RNA SCNV methylation OV S6 S18 T21 S23 T25 S27 S33 S52 S93 S102 S278 S283 S295 S519 T592 S603 S616 protein RNA SCNV methylation PDAC S6 S18 T21 S23 T25 S27 S33 S52 S93 S102 S278 S283 S295 S519 T592 S603 S616 protein RNA SCNV methylation UCEC S6 S18 T21 S23 T25 S27 S33 S52 S93 S102 S278 S283 S295 S519 T592 S603 S616 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S6
S18
T21
S23
T25
S27
S33
S52
S93
S102
S278
S283
S295
S519
T592
S603
S616
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S6
S18
T21
S23
T25
S27
S33
S52
S93
S102
S278
S283
S295
S519
T592
S603
S616
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.