Protein: ENSP00000496954
Gene: MYO1C

LinkedOmicsKB © 2022-2023 Zhang Lab

MYO1C:
myosin IC

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S29PCKLALGSDGVRVTM2117------------44----9118
S108MERYRGVSFYEVPPH18------------44------
S343KYLTRLLSVEGSTLR493--------28185544----245
S367AKGEELLSPLNLEQA110----------55--------
S408LASKDVESPSWRSTT71020--8772--90-74449486110101--105449518
S410SKDVESPSWRSTTVL6223--168----301420182220--3918162
S536ADQRTRKSLGRGEFR18--44----------------
S592CFDRSELSDKKRPET435--43------55----9252
S607VATQFKMSLLQLVEI18--44----------------
S736ALEVRRQSLATKIQA7830--8162--73-704154498375--92379518
Showing 1 to 10 of 20 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S29PCKLALGSDGVRVTM-0.48----------0.48
S108MERYRGVSFYEVPPH-----------
S343KYLTRLLSVEGSTLR-0.4-----0.4-----
S367AKGEELLSPLNLEQA-----------
S408LASKDVESPSWRSTT-0.72-1.4e-4--0.012-2.1e-27-4.2e-29-3.6e-120.022
S410SKDVESPSWRSTTVL-2.7e-20-----0.18-6e-11-3.9e-12--2.8e-4-
S536ADQRTRKSLGRGEFR-----------
S592CFDRSELSDKKRPET-----------
S607VATQFKMSLLQLVEI-----------
S736ALEVRRQSLATKIQA-2.6e-34-0.79---4.2e-9-4.4e-18-7.3e-27-0.41-9.5e-9
Showing 1 to 10 of 20 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS29S108S343S367S408S410S536S592S607S736T786S815S832S864T903S916S1015S1022T1034S1041proteinRNASCNVmethylationCCRCCS29S108S343S367S408S410S536S592S607S736T786S815S832S864T903S916S1015S1022T1034S1041proteinRNASCNVmethylationCOADS29S108S343S367S408S410S536S592S607S736T786S815S832S864T903S916S1015S1022T1034S1041proteinRNASCNVmethylationGBMS29S108S343S367S408S410S536S592S607S736T786S815S832S864T903S916S1015S1022T1034S1041proteinRNASCNVmethylationHNSCCS29S108S343S367S408S410S536S592S607S736T786S815S832S864T903S916S1015S1022T1034S1041proteinRNASCNVmethylationLSCCS29S108S343S367S408S410S536S592S607S736T786S815S832S864T903S916S1015S1022T1034S1041proteinRNASCNVmethylationLUADS29S108S343S367S408S410S536S592S607S736T786S815S832S864T903S916S1015S1022T1034S1041proteinRNASCNVmethylationOVS29S108S343S367S408S410S536S592S607S736T786S815S832S864T903S916S1015S1022T1034S1041proteinRNASCNVmethylationPDACS29S108S343S367S408S410S536S592S607S736T786S815S832S864T903S916S1015S1022T1034S1041proteinRNASCNVmethylationUCECS29S108S343S367S408S410S536S592S607S736T786S815S832S864T903S916S1015S1022T1034S1041proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.