RPS10: ribosomal protein S10
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
4ug0 chain SK
4v6x chain AK
5a2q chain K
5aj0 chain BK
5flx chain K
5lks chain SK
5oa3 chain K
5t2c chain Av
5vyc chain K1
5vyc chain K2
5vyc chain K3
5vyc chain K4
5vyc chain K5
5vyc chain K6
6fec chain t
6g51 chain K
6g53 chain K
6g5h chain K
6g5i chain K
6ip5 chain 2u
6ip6 chain 2u
6ip8 chain 2u
6ole chain SK
6olf chain SK
6olg chain BK
6oli chain SK
6olz chain BK
6om0 chain SK
6om7 chain SK
6qzp chain SK
6xa1 chain SK
6y0g chain SK
6y2l chain SK
6y57 chain SK
6ybs chain a
6z6l chain SK
6z6m chain SK
6z6n chain SK
6zlw chain M
6zm7 chain SK
6zme chain SK
6zmi chain SK
6zmo chain SK
6zmt chain M
6zmw chain a
6zn5 chain M
6zoj chain K
6zol chain K
6zon chain u
6zp4 chain u
6zuo chain K
6zv6 chain K
6zvh chain K
6zvj chain u
6zxd chain K
6zxe chain K
6zxf chain K
6zxg chain K
6zxh chain K
7a09 chain u
7k5i chain K
7qp6 chain a
7qp7 chain a
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S146 KAEAGAGS ATEFQFR 10 1225 96 - 43 38 81 89 99 - 68 42 102 95 67 61 77 17 101 42 89 18
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S146 KAEAGAGS ATEFQFR 4.6e-17 - -0.11 1.9e-8 - 1.5e-7 2.4e-15 -0.09 0.19 8.9e-8 0.11
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S146
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S146 protein RNA SCNV methylation CCRCC S146 protein RNA SCNV methylation COAD S146 protein RNA SCNV methylation GBM S146 protein RNA SCNV methylation HNSCC S146 protein RNA SCNV methylation LSCC S146 protein RNA SCNV methylation LUAD S146 protein RNA SCNV methylation OV S146 protein RNA SCNV methylation PDAC S146 protein RNA SCNV methylation UCEC S146 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S146
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S146
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.