Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1f9e chain A
1f9e chain B
1f9e chain C
1f9e chain D
1f9e chain E
1f9e chain F
1f9e chain G
1f9e chain H
1f9e chain I
1f9e chain J
1f9e chain K
1f9e chain L
1i4e chain B
1qdu chain A
1qdu chain B
1qdu chain C
1qdu chain D
1qdu chain E
1qdu chain F
1qdu chain G
1qdu chain H
1qdu chain I
1qdu chain J
1qdu chain K
1qdu chain L
1qtn chain A
1qtn chain B
2c2z chain A
2c2z chain B
2fun chain B
2fun chain D
2k7z chain A
2y1l chain A
2y1l chain B
2y1l chain C
2y1l chain D
3h11 chain B
3kjn chain A
3kjn chain B
3kjq chain A
3kjq chain B
4jj7 chain A
4prz chain A
4ps1 chain A
4ps1 chain B
4ps1 chain C
4ps1 chain D
4zbw chain A
4zbw chain B
5h31 chain A
5h31 chain B
5h31 chain C
5h31 chain D
5h33 chain A
5h33 chain B
5jqe chain A
5l08 chain A
5l08 chain B
5l08 chain C
5l08 chain D
5l08 chain E
5l08 chain F
5l08 chain G
5l08 chain H
5l08 chain I
6agw chain A
6px9 chain A
6px9 chain B
6px9 chain C
6px9 chain D
6px9 chain E
6px9 chain F
6x8h chain A
6x8h chain B
7dee chain B
7lvj chain A
7lvm chain A
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S16 DIGEQLDS EDLASLK 5 242 - - 17 8 - - - - 12 6 25 22 75 69 - - - - 5 3 S188 FSKERSSS LEGSPDE 1 9 - - - - - - - - - - - - 5 4 - - - - - - S197 EGSPDEFS NGEELCG 4 80 18 - 13 4 - - - - - - 17 19 5 4 - - - - - - T207 EELCGVMT ISDSPRE 1 9 - - - - - - - - - - - - 5 4 - - - - - - S209 LCGVMTIS DSPREQD 3 39 - - - - - - - - 7 3 10 10 5 4 - - - - - - S211 GVMTISDS PREQDSE 7 182 6 - - - - - 10 - 28 13 15 14 18 16 7 2 - - 44 9 S219 PREQDSES QTLDKVY 2 27 - - - - - - - - - - 5 4 10 8 - - - - - - T373 QKGIPVET DSEEQPY 1 9 - - - - - - - - - - - - 5 4 - - - - - - S375 GIPVETDS EEQPYLE 1 10 - - - - - - - - - - 5 5 - - - - - - - - S387 YLEMDLSS PQTRYIP 1 52 - - - - - - - - - - - - - - - - - - 43 9
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S16 DIGEQLDS EDLASLK 7.3e-3 - - - - - 0.2 0.012 - - - S188 FSKERSSS LEGSPDE - - - - - - - - - - - S197 EGSPDEFS NGEELCG - - - - - - - - - - - T207 EELCGVMT ISDSPRE - - - - - - - - - - - S209 LCGVMTIS DSPREQD - - - - - - - - - - - S211 GVMTISDS PREQDSE 0.41 - - - - 0.41 - - - - - S219 PREQDSES QTLDKVY - - - - - - - - - - - T373 QKGIPVET DSEEQPY - - - - - - - - - - - S375 GIPVETDS EEQPYLE - - - - - - - - - - - S387 YLEMDLSS PQTRYIP - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S16
S188
S197
T207
S209
S211
S219
T373
S375
S387
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S16 S188 S197 T207 S209 S211 S219 T373 S375 S387 protein RNA SCNV methylation CCRCC S16 S188 S197 T207 S209 S211 S219 T373 S375 S387 protein RNA SCNV methylation COAD S16 S188 S197 T207 S209 S211 S219 T373 S375 S387 protein RNA SCNV methylation GBM S16 S188 S197 T207 S209 S211 S219 T373 S375 S387 protein RNA SCNV methylation HNSCC S16 S188 S197 T207 S209 S211 S219 T373 S375 S387 protein RNA SCNV methylation LSCC S16 S188 S197 T207 S209 S211 S219 T373 S375 S387 protein RNA SCNV methylation LUAD S16 S188 S197 T207 S209 S211 S219 T373 S375 S387 protein RNA SCNV methylation OV S16 S188 S197 T207 S209 S211 S219 T373 S375 S387 protein RNA SCNV methylation PDAC S16 S188 S197 T207 S209 S211 S219 T373 S375 S387 protein RNA SCNV methylation UCEC S16 S188 S197 T207 S209 S211 S219 T373 S375 S387 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S16
S188
S197
T207
S209
S211
S219
T373
S375
S387
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S16
S188
S197
T207
S209
S211
S219
T373
S375
S387
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.