Basic information

Full name
protein kinase cAMP-activated catalytic subunit alpha
Ensembl
ENSG00000072062.14
Summary
This gene encodes one of the catalytic subunits of protein kinase A, which exists as a tetrameric holoenzyme with two regulatory subunits and two catalytic subunits, in its inactive form. cAMP causes the dissociation of the inactive holoenzyme into a dimer of regulatory subunits bound to four cAMP and two free monomeric catalytic subunits. Four different regulatory subunits and three catalytic subunits have been identified in humans. cAMP-dependent phosphorylation of proteins by protein kinase A is important to many cellular processes, including differentiation, proliferation, and apoptosis. Constitutive activation of this gene caused either by somatic mutations, or genomic duplications of regions that include this gene, have been associated with hyperplasias and adenomas of the adrenal cortex and are linked to corticotropin-independent Cushing's syndrome. Alternative splicing results in multiple transcript variants encoding different isoforms. Tissue-specific isoforms that differ at the N-terminus have been described, and these isoforms may differ in the post-translational modifications that occur at the N-terminus of some isoforms. [provided by RefSeq, Jan 2015]
Annotation
Cancer driver (Oncogene) Druggable target (Tier T3) Protein Kinase

Protein product

Phosphosites on the primary protein product
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Tumor and normal comparison

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Signed p-values
Data type
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
RNA-1e-7--4.1e-12--0.93-8.4e-30.12--7.0e-5-
protein-9.9e-56--1.9e-21-1.5e-19--1.2e-7-4.6e-28-1.2e-4-0.16-5.3e-5-0.72

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

mRNA expression at gene level
BRCACCRCCCOADGBMHNSCCLSCCLUADOVPDACUCEC77.588.599.51010.51111.51212.513log2(RSEM+1)tumornormal
Protein expression
BRCACCRCCCOADGBMHNSCCLSCCLUADOVPDACUCEC23.52424.52525.52626.52727.52828.5log2(MS1 intensity)tumornormal

* Mild outlier: filled circle; Extreme outlier: empty circle.

Phenotype and mutation association

Manhattan plot summarizing associations of phenotypes and mutations across all cohorts and omics data types

BRCACCRCCCOADGBMHNSCCLSCCLUADOVPDACUCEC0246810121416180-2-4-6-8-10-12-14-16-18Pan-cancer0510152025300-5-10-15-20-25-30proteinRNASCNVclinicalpathwaycell typegenomicmutation-log10 of P-value

* Data points of significant associations above and below the dotted lines can be hovered to show the phenotype.

Associations of the protein abundance of PRKACA with phenotypes and mutations

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Signed p-values
Phenotype
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
xcell: Cancer associated fibroblast6.6e-130.0770.0120.0990.862.3e-80.031.2e-60.666.9e-30.39
xcell: microenvironment score1.6e-110.96-0.920.0824.8e-31.2e-43.0e-45.7e-6-0.830.0333.8e-3
xcell: Hematopoietic stem cell2.4e-110.0570.310.120.72.6e-78.7e-39.2e-60.610.0170.25
xcell: stroma score3.5e-110.240.0910.0830.576.4e-90.0188.2e-6-0.750.0180.26
PROGENy: Trail2.2e-10-0.860.740.643.8e-54.5e-83.0e-41.2e-4-0.520.410.027
ESTIMATE: StromalScore6.3e-100.180.0850.131.5e-33.3e-62.5e-30.044-0.120.020.18
xcell: Macrophage M21.1e-90.990.590.671.8e-35.4e-56.3e-40.0110.420.0270.031
ESTIMATE: ESTIMATEScore4.3e-90.50.730.113.9e-37.1e-51.8e-47.4e-3-0.390.0530.11
xcell: Granulocyte-monocyte progenitor2.6e-80.0850.050.0570.152.5e-70.220.38-0.980.0060.57
HALLMARK_BILE_ACID_METABOLISM3.6e-80.350.860.710.0385.1e-50.170.0221.7e-30.050.31
Showing 1 to 10 of 256 rows

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots. The matrix icons in each row can be clicked to show a heatmap summary of associations across all cohorts and omics. The rows in the table can be expanded to show results from other omics.

Cis-association

Associations between omics data of PRKACA

BRCA0.340.050.32proteinmRNASCNVmethylationCCRCC-0.12-0.080.10-0.080.050.07proteinmRNASCNVmethylationCOAD0.100.100.25proteinmRNASCNVmethylationGBM0.160.14-0.15-0.200.30-0.30proteinmRNASCNVmethylationHNSCC0.360.060.190.030.21-0.01proteinmRNASCNVmethylationLSCC0.33-0.220.29-0.240.42-0.40proteinmRNASCNVmethylationLUAD0.22-0.080.44-0.050.45-0.10proteinmRNASCNVmethylationOV0.200.440.54proteinmRNASCNVmethylationPDAC0.01-0.260.080.220.03-0.34proteinmRNASCNVmethylationUCEC0.28-0.270.13-0.23-0.030.00proteinmRNASCNVmethylation

* The numbers are Spearman correlation coefficients and can be clicked to show the scatter plots. The color and size of the circles correlate with the coefficients.

Trans-association

Associations of the protein abundance of PRKACA and the protein abundance of other genes

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Signed p-values
Gene
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots. The matrix icons in each row can be clicked to show a heatmap summary of associations across all cohorts and omics. The rows in the table can be expanded to show results from other omics.

Gene set enrichment analysis

Submit genes and the common logarithm of the p-values of their association with to WebGestalt.