PDE9A: phosphodiesterase 9A
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
2hd1 chain A
2hd1 chain B
2yy2 chain A
2yy2 chain B
3dy8 chain A
3dy8 chain B
3dyl chain A
3dyl chain B
3dyn chain A
3dyn chain B
3dyq chain A
3dyq chain B
3dys chain A
3dys chain B
3jsi chain A
3jsi chain B
3jsw chain A
3jsw chain B
3k3e chain A
3k3e chain B
3k3h chain A
3k3h chain B
3n3z chain A
3n3z chain B
3qi3 chain A
3qi3 chain B
3qi4 chain A
3qi4 chain B
4e90 chain A
4e90 chain B
4g2j chain A
4g2j chain B
4g2l chain A
4g2l chain B
4gh6 chain A
4gh6 chain B
4y86 chain A
4y86 chain B
4y87 chain A
4y87 chain B
4y8c chain A
4y8c chain B
6a3n chain A
6a3n chain B
6lzz chain A
6lzz chain B
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S569 ELQKKTDS LTSGATE 1 19 - - - - - - 19 - - - - - - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S569 ELQKKTDS LTSGATE - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S569
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S569 protein RNA SCNV methylation CCRCC S569 protein RNA SCNV methylation COAD S569 protein RNA SCNV methylation GBM S569 protein RNA SCNV methylation HNSCC S569 protein RNA SCNV methylation LSCC S569 protein RNA SCNV methylation LUAD S569 protein RNA SCNV methylation OV S569 protein RNA SCNV methylation PDAC S569 protein RNA SCNV methylation UCEC S569 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S569
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S569
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.