NAB2:
NGFI-A binding protein 2

Lollipop plot

Phosphosites location and occurrence

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Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S6__MHRAPSPTAEQPP10128587-6348869381-1025993867469831991389518
S18QPPGGGDSARRTLQP131------------------247
S131SIPLFKISETAGTRK218------9-----------72
S140TAGTRKGSMSNGHGS830830-----90-1372925441444718185
S142GTRKGSMSNGHGSPG61239-44----972925108--135--
S147SMSNGHGSPGEKAGS91126114-4140--99-108621089910697831926119518
S157EKAGSARSFSPKSPL217------------54--53--
S159AGSARSFSPKSPLEL1030924-984599-1261084471428418
S162ARSFSPKSPLELGEK101310113-9472312399-98551089997906215100419518
S171LELGEKLSPLPGGPG101499122-10380807399-1086210899105978318105449518
Showing 1 to 10 of 23 rows
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S6__MHRAPSPTAEQPP1.1e-4-0.290.86-5.9e-83.8e-100.012-0.45-0.32-6.3e-3
S18QPPGGGDSARRTLQP-----------
S131SIPLFKISETAGTRK-----------
S140TAGTRKGSMSNGHGS0.89-----0.4---0.52-
S142GTRKGSMSNGHGSPG0.44-----0.44----
S147SMSNGHGSPGEKAGS8e-10--0.11--2.1e-81.1e-104.3e-122.2e-5-8.5e-3-6.4e-3
S157EKAGSARSFSPKSPL-----------
S159AGSARSFSPKSPLEL-2.0e-4----------2.0e-4
S162ARSFSPKSPLELGEK1.5e-9--2.5e-40.9-1.7e-76.7e-218.4e-180.840.22-6.6e-5
S171LELGEKLSPLPGGPG1.2e-10-7.5e-130.012-5.2e-83.3e-20-1.3e-30.970.32-8.6e-5
Showing 1 to 10 of 23 rows
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS6S18S131S140S142S147S157S159S162S171S189T190S193S205S209T220S277S289T434S471S479S514S515proteinRNASCNVmethylationCCRCCS6S18S131S140S142S147S157S159S162S171S189T190S193S205S209T220S277S289T434S471S479S514S515proteinRNASCNVmethylationCOADS6S18S131S140S142S147S157S159S162S171S189T190S193S205S209T220S277S289T434S471S479S514S515proteinRNASCNVmethylationGBMS6S18S131S140S142S147S157S159S162S171S189T190S193S205S209T220S277S289T434S471S479S514S515proteinRNASCNVmethylationHNSCCS6S18S131S140S142S147S157S159S162S171S189T190S193S205S209T220S277S289T434S471S479S514S515proteinRNASCNVmethylationLSCCS6S18S131S140S142S147S157S159S162S171S189T190S193S205S209T220S277S289T434S471S479S514S515proteinRNASCNVmethylationLUADS6S18S131S140S142S147S157S159S162S171S189T190S193S205S209T220S277S289T434S471S479S514S515proteinRNASCNVmethylationOVS6S18S131S140S142S147S157S159S162S171S189T190S193S205S209T220S277S289T434S471S479S514S515proteinRNASCNVmethylationPDACS6S18S131S140S142S147S157S159S162S171S189T190S193S205S209T220S277S289T434S471S479S514S515proteinRNASCNVmethylationUCECS6S18S131S140S142S147S157S159S162S171S189T190S193S205S209T220S277S289T434S471S479S514S515proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.