Protein: ENSP00000311513
Gene: RSF1

LinkedOmicsKB © 2022-2023 Zhang Lab

RSF1:
remodeling and spacing factor 1

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S223NSSQQDNSSRESPSL839113-3735--90-63553433--35136616
S224SSQQDNSSRESPSLE844121-54--17-211388823837--23106616
S227QDNSSRESPSLEDEE9130286-9876--99-10862108991101017716105449518
S229NSSRESPSLEDEETK5153--98--9---403744----366
T241ETKKEEETPKQEEQK94709-2820--72-4428494545407132152411
S266PMDLENRSTANVLEE19------------------72
S392KKREIKLSDDFDSPV82298-----17-503255891334319152
S397KLSDDFDSPVKGPLC101250122-6856453699-103591039311010031878328918
T408GPLCKSVTPTKEFLK2186----6957--------5010----
Y472YETKEESYSPSKDRN11717-------------------
Showing 1 to 10 of 61 rows
102550100
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S223NSSQQDNSSRESPSL-0.79--0.81----0.016--6.5e-50.2
S224SSQQDNSSRESPSLE1.1e-3----1.4e-32.0e-56.1e-3--6.4e-40.63
S227QDNSSRESPSLEDEE1.7e-4--5.3e-17--0.0121.2e-231.9e-180.25-7.9e-110.028
S229NSSRESPSLEDEETK5.3e-9-----5.3e-9----
T241ETKKEEETPKQEEQK9.3e-11--0.19--0.0511.7e-127.6e-6-0.230.012
S266PMDLENRSTANVLEE-----------
S392KKREIKLSDDFDSPV0.98-----0.072---0.067-
S397KLSDDFDSPVKGPLC1.8e-49--0.426.9e-13-1.3e-151.1e-323e-24--0.571.2e-3
T408GPLCKSVTPTKEFLK2e-11--4.4e-9----2.9e-4--
Y472YETKEESYSPSKDRN-----------
Showing 1 to 10 of 61 rows
102550100
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS223S224S227S229T241S266S392S397T408Y472S473S524T539S540S561T563S570S604S622T628S629S748S778S862S865S867S870S871S874S882S1096S1098S1105S1153S1172S1180S1221S1223S1226S1245S1246S1247S1249S1258S1277T1278Y1281S1282T1305S1310S1325S1345S1359S1364S1370T1371S1375S1391T1393S1438proteinRNASCNVmethylationCCRCCS223S224S227S229T241S266S392S397T408Y472S473S524T539S540S561T563S570S604S622T628S629S748S778S862S865S867S870S871S874S882S1096S1098S1105S1153S1172S1180S1221S1223S1226S1245S1246S1247S1249S1258S1277T1278Y1281S1282T1305S1310S1325S1345S1359S1364S1370T1371S1375S1391T1393S1438proteinRNASCNVmethylationCOADS223S224S227S229T241S266S392S397T408Y472S473S524T539S540S561T563S570S604S622T628S629S748S778S862S865S867S870S871S874S882S1096S1098S1105S1153S1172S1180S1221S1223S1226S1245S1246S1247S1249S1258S1277T1278Y1281S1282T1305S1310S1325S1345S1359S1364S1370T1371S1375S1391T1393S1438proteinRNASCNVmethylationGBMS223S224S227S229T241S266S392S397T408Y472S473S524T539S540S561T563S570S604S622T628S629S748S778S862S865S867S870S871S874S882S1096S1098S1105S1153S1172S1180S1221S1223S1226S1245S1246S1247S1249S1258S1277T1278Y1281S1282T1305S1310S1325S1345S1359S1364S1370T1371S1375S1391T1393S1438proteinRNASCNVmethylationHNSCCS223S224S227S229T241S266S392S397T408Y472S473S524T539S540S561T563S570S604S622T628S629S748S778S862S865S867S870S871S874S882S1096S1098S1105S1153S1172S1180S1221S1223S1226S1245S1246S1247S1249S1258S1277T1278Y1281S1282T1305S1310S1325S1345S1359S1364S1370T1371S1375S1391T1393S1438proteinRNASCNVmethylationLSCCS223S224S227S229T241S266S392S397T408Y472S473S524T539S540S561T563S570S604S622T628S629S748S778S862S865S867S870S871S874S882S1096S1098S1105S1153S1172S1180S1221S1223S1226S1245S1246S1247S1249S1258S1277T1278Y1281S1282T1305S1310S1325S1345S1359S1364S1370T1371S1375S1391T1393S1438proteinRNASCNVmethylationLUADS223S224S227S229T241S266S392S397T408Y472S473S524T539S540S561T563S570S604S622T628S629S748S778S862S865S867S870S871S874S882S1096S1098S1105S1153S1172S1180S1221S1223S1226S1245S1246S1247S1249S1258S1277T1278Y1281S1282T1305S1310S1325S1345S1359S1364S1370T1371S1375S1391T1393S1438proteinRNASCNVmethylationOVS223S224S227S229T241S266S392S397T408Y472S473S524T539S540S561T563S570S604S622T628S629S748S778S862S865S867S870S871S874S882S1096S1098S1105S1153S1172S1180S1221S1223S1226S1245S1246S1247S1249S1258S1277T1278Y1281S1282T1305S1310S1325S1345S1359S1364S1370T1371S1375S1391T1393S1438proteinRNASCNVmethylationPDACS223S224S227S229T241S266S392S397T408Y472S473S524T539S540S561T563S570S604S622T628S629S748S778S862S865S867S870S871S874S882S1096S1098S1105S1153S1172S1180S1221S1223S1226S1245S1246S1247S1249S1258S1277T1278Y1281S1282T1305S1310S1325S1345S1359S1364S1370T1371S1375S1391T1393S1438proteinRNASCNVmethylationUCECS223S224S227S229T241S266S392S397T408Y472S473S524T539S540S561T563S570S604S622T628S629S748S778S862S865S867S870S871S874S882S1096S1098S1105S1153S1172S1180S1221S1223S1226S1245S1246S1247S1249S1258S1277T1278Y1281S1282T1305S1310S1325S1345S1359S1364S1370T1371S1375S1391T1393S1438proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

Loading, please wait
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.