Protein: ENSP00000322390
Gene: FGF13

LinkedOmicsKB © 2022-2023 Zhang Lab

FGF13:
fibroblast growth factor 13

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

Loading, please wait
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S30NACKCVSSPSKGKTS19------9-------------
S208VAMYKEPSLHDLTEF7703--6959--80-6840108993632295--6018
Showing 1 to 2 of 2 rows

Tumor and normal comparison

Loading, please wait
Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S30NACKCVSSPSKGKTS-----------
S208VAMYKEPSLHDLTEF-8.5e-12--6.4e-10---9.2e-8-0.0780.77---0.023
Showing 1 to 2 of 2 rows

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

Loading, please wait
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
HALLMARK_HEDGEHOG_SIGNALINGS2086.4e-5-0.53-0.0372.3e-37.2e-30.950.81-0.066
chromosomal instabilityS2086.1e-4--0.69-0.850.125.8e-60.370.17-0.35
KINASE-PSP_CDK5S2086.6e-4---0.140.370.008---0.071
HALLMARK_PANCREAS_BETA_CELLSS2081.6e-3-0.87-1.1e-40.550.0120.54-0.8-0.39
HALLMARK_SPERMATOGENESISS2084.2e-3-0.13-0.210.378.6e-40.410.38--0.27
PROGENy: TGFbS2080.011-0.024-0.320.35-0.69-0.810.72-4.5e-3
HALLMARK_WNT_BETA_CATENIN_SIGNALINGS2080.014--0.67-0.560.240.360.890.39-1.1e-3
KEAP1 mutationS2080.017-----0.017----
KINASE-PSP_GSK3BS2080.019---0.0160.37-0.81---0.1
HALLMARK_MYOGENESISS2080.02-0.062--0.212.5e-40.48-0.50.75-0.13
Showing 1 to 10 of 516 rows

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS30S208proteinRNASCNVmethylationCCRCCS30S208proteinRNASCNVmethylationCOADS30S208proteinRNASCNVmethylationGBMS30S208proteinRNASCNVmethylationHNSCCS30S208proteinRNASCNVmethylationLSCCS30S208proteinRNASCNVmethylationLUADS30S208proteinRNASCNVmethylationOVS30S208proteinRNASCNVmethylationPDACS30S208proteinRNASCNVmethylationUCECS30S208proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

Loading, please wait
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
WNK2S2081.7e-6---1.3e-48.5e-30.0250.770.028-0.59
CDK16S2081.0e-5-2.7e-3-0.194.2e-50.120.018-0.95--0.56
NTRK2S2085.2e-5---0.190.0422.7e-4----
BRD3S2085.8e-5-0.45-0.0420.0265.6e-40.290.53-0.64
PAK4S2081.1e-4-0.18-0.440.170.0810.152.5e-3-0.59
CAMK2AS2081.2e-4---0.011.4e-6-0.47----
CAMKVS2081.2e-4---1.2e-4------
CLK2S2082.1e-4-0.28-0.160.0890.0450.140.17-0.44
MAST1S2083.1e-4---3.1e-4------
PRKAA2S2083.5e-4--0.6-0.0193.4e-35.6e-40.22---0.5
Showing 1 to 10 of 1076 rows

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

Loading, please wait
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
PTPN1S208-9.4e-9--0.28--2.8e-3-0.007-1.5e-5-0.26-0.85--5.3e-3
PTPRCS208-4.9e-5-0.99--0.67-0.15-9.7e-5-0.43-0.32--1.4e-3
EYA2S208-3.1e-4----0.93--0.12--0.017--1.5e-3
PFKFB4S208-1.1e-3----6.4e-3-0.19-0.91-0.061---0.2
PTPN7S208-2.9e-3-0.17--0.12-0.048-6.2e-5-0.72-0.51--0.46
PFKFB1S208-3.2e-3-----3.2e-3-----
SSH3S208-4.5e-3-0.89--0.079-0.25-2.8e-3-0.24-0.43-0.84
PTPN12S208-5.2e-3--0.046--0.014-0.068-0.110.420.73--0.5
PPP6CS208-5.8e-3-0.75--0.47-0.044-2.8e-40.9-0.66--0.35
INPPL1S208-6.2e-3--0.29--0.0050.61-0.081-0.32-0.59--0.54
Showing 1 to 10 of 480 rows

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.