Protein: ENSP00000329127
Gene: PRKCH

LinkedOmicsKB © 2022-2023 Zhang Lab

PRKCH:
protein kinase C eta

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T25EAVGLQPTRWSLRHS18----------44--------
S28GLQPTRWSLRHSLFK91077106-98767262-9757103948981--86366518
S32TRWSLRHSLFKKGHQ722226-1212--9-311715132824----305
S249INIPHKFSIHNYKVP738217-6444----281530264037--1764414
S317GLQPGNISPTSKLVS101408122-9472707380-10862108991101014910105448318
T319QPGNISPTSKLVSRS15------------------5-
S326TSKLVSRSTLRRQGK969941-7560202436-291788794945--5521546
T327SKLVSRSTLRRQGKE969941-7560202436-291788794945--5521546
S637PFRPRIKSREDVSNF123------------------212
S642IKSREDVSNFDPDFI135--------2411----------
Showing 1 to 10 of 14 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
T25EAVGLQPTRWSLRHS-----------
S28GLQPTRWSLRHSLFK1.8e-12--0.11--0.122.2e-82.7e-12-0.050.006
S32TRWSLRHSLFKKGHQ-0.017-----0.2--0.036---
S249INIPHKFSIHNYKVP-0.018-0.77---2.2e-4-1.7e-4-0.017--2.1e-5
S317GLQPGNISPTSKLVS-1.3e-22-5e-8-3.3e-5--2.8e-7-2.3e-28-2.6e-23-1.2e-3-0.20.094
T319QPGNISPTSKLVSRS-----------
S326TSKLVSRSTLRRQGK0.029-3.8e-40.11--0.77-4.4e-92.5e-3-8.6e-4-
T327SKLVSRSTLRRQGKE0.029-3.8e-40.11--0.77-4.4e-92.5e-3-8.6e-4-
S637PFRPRIKSREDVSNF-----------
S642IKSREDVSNFDPDFI-0.22-----0.22-----
Showing 1 to 10 of 14 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAT25S28S32S249S317T319S326T327S637S642T656S675Y676S678proteinRNASCNVmethylationCCRCCT25S28S32S249S317T319S326T327S637S642T656S675Y676S678proteinRNASCNVmethylationCOADT25S28S32S249S317T319S326T327S637S642T656S675Y676S678proteinRNASCNVmethylationGBMT25S28S32S249S317T319S326T327S637S642T656S675Y676S678proteinRNASCNVmethylationHNSCCT25S28S32S249S317T319S326T327S637S642T656S675Y676S678proteinRNASCNVmethylationLSCCT25S28S32S249S317T319S326T327S637S642T656S675Y676S678proteinRNASCNVmethylationLUADT25S28S32S249S317T319S326T327S637S642T656S675Y676S678proteinRNASCNVmethylationOVT25S28S32S249S317T319S326T327S637S642T656S675Y676S678proteinRNASCNVmethylationPDACT25S28S32S249S317T319S326T327S637S642T656S675Y676S678proteinRNASCNVmethylationUCECT25S28S32S249S317T319S326T327S637S642T656S675Y676S678proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.