Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1g3j chain A
1g3j chain C
1jdh chain A
1jpw chain A
1jpw chain B
1jpw chain C
1luj chain A
1p22 chain C
1qz7 chain A
1t08 chain A
1th1 chain A
1th1 chain B
2gl7 chain A
2gl7 chain D
2z6h chain A
3diw chain C
3diw chain D
3fqn chain C
3fqr chain C
3sl9 chain A
3sl9 chain B
3sl9 chain E
3sl9 chain G
3sla chain A
3sla chain B
3sla chain C
3sla chain D
3sla chain E
3tx7 chain A
4djs chain A
6m90 chain C
6m91 chain C
6m92 chain C
6m93 chain C
6m94 chain C
6o9b chain C
6o9c chain C
6wlx chain B
6wnx chain C
6wnx chain F
6wnx chain I
7afw chain A
7ar4 chain AAA
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S29 VSHWQQQS YLDSGIH 5 76 - - - - - - 34 - 11 7 - - - - 7 1 5 3 8 - Y30 SHWQQQSY LDSGIHS 5 107 - - 21 19 - - - - 23 13 5 4 - - 13 4 3 2 - - S33 QQQSYLDS GIHSGAT 4 50 8 - 8 8 - - 17 - - - - - - - - - - - - 9 S37 YLDSGIHS GATTTAP 3 35 8 - - - - - 18 - - - - - - - - - - - - 9 T40 SGIHSGAT TTAPSLS 3 92 - - 20 20 - - - - 20 15 - - 9 8 - - - - - - T41 GIHSGATT TAPSLSG 6 125 8 - 5 4 - - - - 35 21 15 12 10 8 - - 5 2 - - T42 IHSGATTT APSLSGK 4 48 9 - 8 - - - - - - - 10 9 - - - - 9 3 - - S45 GATTTAPS LSGKGNP 5 104 - - - - - - 54 - 17 10 5 5 - - - - 3 2 8 - S47 TTTAPSLS GKGNPEE 2 28 - - - - - - 9 - - - 10 9 - - - - - - - - S60 EEEDVDTS QVLYEWE 4 58 - - 8 8 - - - - 5 4 5 2 14 12 - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S29 VSHWQQQS YLDSGIH - - - - - - - - - - - Y30 SHWQQQSY LDSGIHS 0.017 - 3.7e-3 - - 0.65 - - - - - S33 QQQSYLDS GIHSGAT - - - - - - - - - - - S37 YLDSGIHS GATTTAP - - - - - - - - - - - T40 SGIHSGAT TTAPSLS -0.042 - -0.03 - - -0.48 - - - - - T41 GIHSGATT TAPSLSG 0.81 - - - - 0.81 - - - - - T42 IHSGATTT APSLSGK - - - - - - - - - - - S45 GATTTAPS LSGKGNP - - - - - - - - - - - S47 TTTAPSLS GKGNPEE - - - - - - - - - - - S60 EEEDVDTS QVLYEWE - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S29
Y30
S33
S37
T40
T41
T42
S45
S47
S60
Y64
S179
S191
S222
T551
S552
T556
Y654
S675
T679
S680
S681
S715
Y716
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S29 Y30 S33 S37 T40 T41 T42 S45 S47 S60 Y64 S179 S191 S222 T551 S552 T556 Y654 S675 T679 S680 S681 S715 Y716 protein RNA SCNV methylation CCRCC S29 Y30 S33 S37 T40 T41 T42 S45 S47 S60 Y64 S179 S191 S222 T551 S552 T556 Y654 S675 T679 S680 S681 S715 Y716 protein RNA SCNV methylation COAD S29 Y30 S33 S37 T40 T41 T42 S45 S47 S60 Y64 S179 S191 S222 T551 S552 T556 Y654 S675 T679 S680 S681 S715 Y716 protein RNA SCNV methylation GBM S29 Y30 S33 S37 T40 T41 T42 S45 S47 S60 Y64 S179 S191 S222 T551 S552 T556 Y654 S675 T679 S680 S681 S715 Y716 protein RNA SCNV methylation HNSCC S29 Y30 S33 S37 T40 T41 T42 S45 S47 S60 Y64 S179 S191 S222 T551 S552 T556 Y654 S675 T679 S680 S681 S715 Y716 protein RNA SCNV methylation LSCC S29 Y30 S33 S37 T40 T41 T42 S45 S47 S60 Y64 S179 S191 S222 T551 S552 T556 Y654 S675 T679 S680 S681 S715 Y716 protein RNA SCNV methylation LUAD S29 Y30 S33 S37 T40 T41 T42 S45 S47 S60 Y64 S179 S191 S222 T551 S552 T556 Y654 S675 T679 S680 S681 S715 Y716 protein RNA SCNV methylation OV S29 Y30 S33 S37 T40 T41 T42 S45 S47 S60 Y64 S179 S191 S222 T551 S552 T556 Y654 S675 T679 S680 S681 S715 Y716 protein RNA SCNV methylation PDAC S29 Y30 S33 S37 T40 T41 T42 S45 S47 S60 Y64 S179 S191 S222 T551 S552 T556 Y654 S675 T679 S680 S681 S715 Y716 protein RNA SCNV methylation UCEC S29 Y30 S33 S37 T40 T41 T42 S45 S47 S60 Y64 S179 S191 S222 T551 S552 T556 Y654 S675 T679 S680 S681 S715 Y716 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S29
Y30
S33
S37
T40
T41
T42
S45
S47
S60
Y64
S179
S191
S222
T551
S552
T556
Y654
S675
T679
S680
S681
S715
Y716
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S29
Y30
S33
S37
T40
T41
T42
S45
S47
S60
Y64
S179
S191
S222
T551
S552
T556
Y654
S675
T679
S680
S681
S715
Y716
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.