Protein: ENSP00000370698
Gene: IL6ST

LinkedOmicsKB © 2022-2023 Zhang Lab

IL6ST:
interleukin 6 signal transducer

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S659WPNVPDPSKSHIAQW19------9-------------
S667KSHIAQWSPHTPPRH101438114-10380919799-108621089910292531399415918
T670IAQWSPHTPPRHNFN1036150-47285499-117151488134177195
S710PFPEDLKSLDLFKKE316778---------25232120------
S773GYRHQVPSVQVFSRS123--1211----------------
S778VPSVQVFSRSESTQP18------------------62
S782QVFSRSESTQPLLDS6157----151245-----441252013252
T783VFSRSESTQPLLDSE102326-54293326-2313151313127141189
S789STQPLLDSEERPEDL36816-1212------1513--------
S820QYFKQNCSQHESSPD19--------------72----
Showing 1 to 10 of 16 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S659WPNVPDPSKSHIAQW-----------
S667KSHIAQWSPHTPPRH-1.2e-51-3.8e-3-2.8e-17--1.5e-3-1.5e-31-3.7e-15-9.0e-4-2.4e-9-2.1e-7
T670IAQWSPHTPPRHNFN4.6e-7-4.6e-7--------
S710PFPEDLKSLDLFKKE-2.2e-15------4.3e-12-1.8e-5---
S773GYRHQVPSVQVFSRS-----------
S778VPSVQVFSRSESTQP-----------
S782QVFSRSESTQPLLDS-0.76---------0.76-
T783VFSRSESTQPLLDSE-4.7e-14---6.2e-10--7.5e-6-----
S789STQPLLDSEERPEDL-----------
S820QYFKQNCSQHESSPD-----------
Showing 1 to 10 of 16 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS659S667T670S710S773S778S782T783S789S820S824S825S838S839S853Y905proteinRNASCNVmethylationCCRCCS659S667T670S710S773S778S782T783S789S820S824S825S838S839S853Y905proteinRNASCNVmethylationCOADS659S667T670S710S773S778S782T783S789S820S824S825S838S839S853Y905proteinRNASCNVmethylationGBMS659S667T670S710S773S778S782T783S789S820S824S825S838S839S853Y905proteinRNASCNVmethylationHNSCCS659S667T670S710S773S778S782T783S789S820S824S825S838S839S853Y905proteinRNASCNVmethylationLSCCS659S667T670S710S773S778S782T783S789S820S824S825S838S839S853Y905proteinRNASCNVmethylationLUADS659S667T670S710S773S778S782T783S789S820S824S825S838S839S853Y905proteinRNASCNVmethylationOVS659S667T670S710S773S778S782T783S789S820S824S825S838S839S853Y905proteinRNASCNVmethylationPDACS659S667T670S710S773S778S782T783S789S820S824S825S838S839S853Y905proteinRNASCNVmethylationUCECS659S667T670S710S773S778S782T783S789S820S824S825S838S839S853Y905proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.