Protein: ENSP00000377953
Gene: RASGRP2

LinkedOmicsKB © 2022-2023 Zhang Lab

RASGRP2:
RAS guanyl releasing protein 2

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S116QEGNRRHSSLIDIDS104447-9876283471-17111412191712451711
S117EGNRRHSSLIDIDSV10101331-8464252046-96559485888135764259518
T134YKWKRQVTQRNPVGQ1087993-5441808163-3216888149431436128475
S391REPRSKSSPTSPTSC4120--44--82-63--------174
S394RSKSSPTSPTSCTPP106447-124342980-6236544966617144176516
T396KSSPTSPTSCTPPPR711123---549-115--151262--109
S397SSPTSPTSCTPPPRP218--------6354--------
T399PTSPTSCTPPPRPPV622633-3220----4444392420----6-
S489SYFLRSSSVLGGRMG4111--44--36---1514------317
S554ECRRRAQSVSLEGSA21058-----97-------------
Showing 1 to 10 of 16 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S116QEGNRRHSSLIDIDS-0.021-0.021-2.6e-8-------
S117EGNRRHSSLIDIDSV-6.8e-3--1.1e-4-0.15-1.4e-6-8.4e-10-6e-8-7.7e-40.14
T134YKWKRQVTQRNPVGQ-4.1e-10--1.8e-7-4e-10-0.022-1.0e-6-0.062-0.53-
S391REPRSKSSPTSPTSC-----------
S394RSKSSPTSPTSCTPP-8.4e-8---0.027-0.46-6e-10-1e-11-0.081-0.69
T396KSSPTSPTSCTPPPR-----------
S397SSPTSPTSCTPPPRP-----------
T399PTSPTSCTPPPRPPV-5.9e-13-0.27----1.4e-15-2.1e-8---
S489SYFLRSSSVLGGRMG-----------
S554ECRRRAQSVSLEGSA-----------
Showing 1 to 10 of 16 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS116S117T134S391S394T396S397T399S489S554S556S560S563S576S578S587proteinRNASCNVmethylationCCRCCS116S117T134S391S394T396S397T399S489S554S556S560S563S576S578S587proteinRNASCNVmethylationCOADS116S117T134S391S394T396S397T399S489S554S556S560S563S576S578S587proteinRNASCNVmethylationGBMS116S117T134S391S394T396S397T399S489S554S556S560S563S576S578S587proteinRNASCNVmethylationHNSCCS116S117T134S391S394T396S397T399S489S554S556S560S563S576S578S587proteinRNASCNVmethylationLSCCS116S117T134S391S394T396S397T399S489S554S556S560S563S576S578S587proteinRNASCNVmethylationLUADS116S117T134S391S394T396S397T399S489S554S556S560S563S576S578S587proteinRNASCNVmethylationOVS116S117T134S391S394T396S397T399S489S554S556S560S563S576S578S587proteinRNASCNVmethylationPDACS116S117T134S391S394T396S397T399S489S554S556S560S563S576S578S587proteinRNASCNVmethylationUCECS116S117T134S391S394T396S397T399S489S554S556S560S563S576S578S587proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.