ELAVL1: ELAV like RNA binding protein 1
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
3hi9 chain A
3hi9 chain B
3hi9 chain C
3hi9 chain D
4ed5 chain A
4ed5 chain B
4egl chain A
4fxv chain A
4fxv chain B
4fxv chain C
4fxv chain D
5szw chain A
6g2k chain A
6g2k chain B
6g2k chain C
6gc5 chain A
6gc5 chain B
6gc5 chain C
6gc5 chain D
6gd1 chain A
6gd1 chain B
6gd2 chain A
6gd2 chain B
6gd2 chain C
6gd3 chain A
6gd3 chain B
6gd3 chain C
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S100 VSYARPSS EVIKDAN 7 372 49 - 20 20 - - 26 - - - 54 52 13 12 - - 48 20 54 4 S202 LLSQLYHS PARRFGG 10 1296 79 - 58 37 92 90 99 - 101 59 93 84 74 66 83 19 105 44 95 18 S318 GDKILQVS FKTNKSH 5 101 17 - - - - - 19 - 18 9 - - 13 12 - - 10 3 - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S100 VSYARPSS EVIKDAN 3.3e-4 - 0.013 - - - 8.1e-5 - - -0.84 - S202 LLSQLYHS PARRFGG 3.2e-30 - 8.6e-5 0.095 - 1.9e-6 9.5e-13 8.3e-9 2.3e-3 2.2e-3 3.3e-3 S318 GDKILQVS FKTNKSH - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S100
S202
S318
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S100 S202 S318 protein RNA SCNV methylation CCRCC S100 S202 S318 protein RNA SCNV methylation COAD S100 S202 S318 protein RNA SCNV methylation GBM S100 S202 S318 protein RNA SCNV methylation HNSCC S100 S202 S318 protein RNA SCNV methylation LSCC S100 S202 S318 protein RNA SCNV methylation LUAD S100 S202 S318 protein RNA SCNV methylation OV S100 S202 S318 protein RNA SCNV methylation PDAC S100 S202 S318 protein RNA SCNV methylation UCEC S100 S202 S318 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S100
S202
S318
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S100
S202
S318
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.