RPL6: ribosomal protein L6
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
4ug0 chain LE
4v6x chain CE
5aj0 chain AE
5lks chain LE
5t2c chain H
6ip5 chain 1H
6ip6 chain 1H
6ip8 chain 1H
6lqm chain v
6lsr chain v
6lss chain o
6lu8 chain o
6ole chain G
6olf chain G
6olg chain AE
6oli chain G
6olz chain AE
6om0 chain G
6om7 chain G
6qzp chain LE
6w6l chain G
6xa1 chain LE
6y0g chain LE
6y2l chain LE
6y57 chain LE
6y6x chain LE
6z6l chain LE
6z6m chain LE
6z6n chain LE
6zm7 chain LE
6zme chain LE
6zmi chain LE
6zmo chain LE
7bhp chain LE
7f5s chain LE
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T11 EKVEKPDT KEKKPEA 1 31 - - - - - - - - - - - - - - - - 21 10 - - S74 AMYKRKYS AAKSKVE 2 61 - - - - - - 26 - - - - - - - - - 24 11 - - S255 IDQKAVDS QILPKIK 1 9 - - - - - - - - 5 4 - - - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
T11 EKVEKPDT KEKKPEA -8.6e-7 - - - - - - - - -8.6e-7 - S74 AMYKRKYS AAKSKVE -3.8e-4 - - - - - - - - -3.8e-4 - S255 IDQKAVDS QILPKIK - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
T11
S74
S255
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA T11 S74 S255 protein RNA SCNV methylation CCRCC T11 S74 S255 protein RNA SCNV methylation COAD T11 S74 S255 protein RNA SCNV methylation GBM T11 S74 S255 protein RNA SCNV methylation HNSCC T11 S74 S255 protein RNA SCNV methylation LSCC T11 S74 S255 protein RNA SCNV methylation LUAD T11 S74 S255 protein RNA SCNV methylation OV T11 S74 S255 protein RNA SCNV methylation PDAC T11 S74 S255 protein RNA SCNV methylation UCEC T11 S74 S255 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
T11
S74
S255
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
T11
S74
S255
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.