RPS19: ribosomal protein S19
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
4ug0 chain ST
4v6x chain AT
5a2q chain T
5aj0 chain BT
5flx chain T
5lks chain ST
5oa3 chain T
5t2c chain AU
5vyc chain T1
5vyc chain T2
5vyc chain T3
5vyc chain T4
5vyc chain T5
5vyc chain T6
6g18 chain T
6g4s chain T
6g4w chain T
6g51 chain T
6g53 chain T
6g5h chain T
6g5i chain T
6ip5 chain 20
6ip6 chain 20
6ip8 chain 20
6ole chain ST
6olf chain ST
6olg chain BT
6oli chain ST
6olz chain BT
6om0 chain ST
6om7 chain ST
6qzp chain ST
6xa1 chain ST
6y0g chain ST
6y2l chain ST
6y57 chain ST
6ybs chain d
6z6l chain ST
6z6m chain ST
6z6n chain ST
6zlw chain U
6zm7 chain ST
6zme chain ST
6zmi chain ST
6zmo chain ST
6zmt chain U
6zmw chain d
6zn5 chain U
6zoj chain T
6zol chain T
6zon chain x
6zp4 chain x
6zuo chain T
6zv6 chain T
6zvh chain T
6zvj chain x
6zxd chain T
6zxe chain T
6zxf chain T
6zxg chain T
6zxh chain T
7a09 chain x
7k5i chain T
7mqa chain NP
7qp6 chain d
7qp7 chain d
7tql chain U
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S74 RGGAGVGS MTKIYGG 7 369 18 - 3 3 - - - - 56 34 10 9 52 49 - - 78 33 22 2 S93 GVMPSHFS RGSKSVA 4 43 - - 4 4 - - - - 6 3 5 5 - - - - 10 6 - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S74 RGGAGVGS MTKIYGG -0.078 - - - - -0.29 - 0.003 - -6.4e-7 - S93 GVMPSHFS RGSKSVA - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S74
S93
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S74 S93 protein RNA SCNV methylation CCRCC S74 S93 protein RNA SCNV methylation COAD S74 S93 protein RNA SCNV methylation GBM S74 S93 protein RNA SCNV methylation HNSCC S74 S93 protein RNA SCNV methylation LSCC S74 S93 protein RNA SCNV methylation LUAD S74 S93 protein RNA SCNV methylation OV S74 S93 protein RNA SCNV methylation PDAC S74 S93 protein RNA SCNV methylation UCEC S74 S93 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S74
S93
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S74
S93
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.