Basic information

Full name
chromosome 6 open reading frame 120
Ensembl
ENSG00000185127.6
Summary
This gene encodes a conserved, N-glycosylated protein that likely functions in the cellular response to endoplasmic reticulum stress. This protein is able to induce apoptosis in vitro in CD4+ T-cells. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2015]

Protein product

  • ENST00000332290.3 Primary ENSP00000346931.1 (0 phosphosite)
Phosphosites on the primary protein product
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Tumor and normal comparison

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Signed p-values
Data type
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
RNA-0.33-0.23---0.772.8e-3-0.029--9.0e-5-
protein-0.024--6.6e-6-0.98-0.0128e-7-2.9e-3-0.077-3.4e-5-

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

mRNA expression at gene level
BRCACCRCCCOADGBMHNSCCLSCCLUADOVPDACUCEC77.588.599.51010.51111.512log2(RSEM+1)tumornormal
Protein expression
BRCACCRCCCOADGBMHNSCCLSCCLUADOVPDACUCEC1818.51919.52020.52121.52222.52323.5log2(MS1 intensity)tumornormal

* Mild outlier: filled circle; Extreme outlier: empty circle.

Phenotype and mutation association

Manhattan plot summarizing associations of phenotypes and mutations across all cohorts and omics data types

BRCACCRCCCOADGBMHNSCCLSCCLUADOVPDACUCEC0123456780-1-2-3-4-5-6-7-8Pan-cancer012345678910110-1-2-3-4-5-6-7-8-9-10-11proteinRNASCNVclinicalpathwaycell typegenomicmutation-log10 of P-value

* Data points of significant associations above and below the dotted lines can be hovered to show the phenotype.

Associations of the protein abundance of C6orf120 with phenotypes and mutations

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Signed p-values
Phenotype
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
HALLMARK_PEROXISOME2.8e-40.220.0990.0560.43-0.380.140.470.150.0760.16
PERT-PSP_UV1.7e-3----1.7e-3-----
SMAD4 mutation2.9e-3--------2.9e-3-
cibersort: Myeloid dendritic cell activated3.7e-30.290.0820.24-0.390.0280.170.110.98-0.870.31
HALLMARK_OXIDATIVE_PHOSPHORYLATION4.9e-3-0.430.14-0.80.540.872.3e-30.0280.046-0.970.62
KINASE-PSP_ERK1/MAPK35.2e-30.180.64-0.120.220.264.8e-38.5e-30.450.94-0.93
PATH-NP_IL33_PATHWAY5.7e-3---5.7e-3------
HALLMARK_FATTY_ACID_METABOLISM7.3e-30.230.14-0.450.061-0.670.340.50.0960.680.16
KINASE-PSP_ERK2/MAPK19.9e-3-0.370.4-0.530.0110.0191.4e-40.023-0.230.71-0.19
PROGENy: Estrogen0.010.0280.28-0.270.370.850.545.1e-3-0.80.950.11
Showing 1 to 10 of 256 rows

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots. The matrix icons in each row can be clicked to show a heatmap summary of associations across all cohorts and omics. The rows in the table can be expanded to show results from other omics.

Cis-association

Associations between omics data of C6orf120

BRCA0.200.290.60proteinmRNASCNVmethylationCCRCC0.32-0.070.17-0.210.50-0.20proteinmRNASCNVmethylationCOAD0.17-0.100.31proteinmRNASCNVmethylationGBM0.24-0.220.21-0.180.54-0.20proteinmRNASCNVmethylationHNSCC0.45-0.170.32-0.140.47-0.09proteinmRNASCNVmethylationLSCC0.55-0.000.02-0.230.34-0.15proteinmRNASCNVmethylationLUAD0.120.050.13-0.090.58-0.23proteinmRNASCNVmethylationOV0.370.280.71proteinmRNASCNVmethylationPDAC0.29-0.070.20-0.260.52-0.09proteinmRNASCNVmethylationUCEC0.54-0.14-0.05-0.070.08-0.21proteinmRNASCNVmethylation

* The numbers are Spearman correlation coefficients and can be clicked to show the scatter plots. The color and size of the circles correlate with the coefficients.

Trans-association

Associations of the protein abundance of C6orf120 and the protein abundance of other genes

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Signed p-values
Gene
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots. The matrix icons in each row can be clicked to show a heatmap summary of associations across all cohorts and omics. The rows in the table can be expanded to show results from other omics.

Gene set enrichment analysis

Submit genes and the common logarithm of the p-values of their association with to WebGestalt.