- TAF12:
- TATA-box binding protein associated factor 12
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
T43 | AVVKIPGTPGAGGRL | 10 | 529 | 48 | - | 52 | 35 | 9 | 9 | 18 | - | 13 | 5 | 89 | 81 | 61 | 56 | 13 | 4 | 8 | 4 | 20 | 4 |
S51 | PGAGGRLSPENNQVL | 10 | 1552 | 122 | - | 103 | 79 | 97 | 100 | 99 | - | 108 | 62 | 108 | 99 | 110 | 101 | 83 | 19 | 105 | 44 | 95 | 18 |
S108 | QLARHRKSSTLEVKD | 3 | 55 | 36 | - | - | - | - | - | - | - | - | - | 5 | 5 | - | - | - | - | - | - | - | 9 |
S109 | LARHRKSSTLEVKDV | 4 | 33 | - | - | - | - | - | - | 9 | - | 5 | 3 | 5 | 4 | - | - | - | - | 5 | 2 | - | - |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
T43 | AVVKIPGTPGAGGRL | 0.026 | - | 6.9e-6 | - | - | - | 8.2e-5 | -4.8e-6 | - | - | - |
S51 | PGAGGRLSPENNQVL | 9.9e-18 | - | 2.6e-14 | 2e-22 | - | 0.21 | 3.2e-8 | -5.6e-8 | -0.16 | 2.4e-9 | 0.32 |
S108 | QLARHRKSSTLEVKD | - | - | - | - | - | - | - | - | - | - | - |
S109 | LARHRKSSTLEVKDV | - | - | - | - | - | - | - | - | - | - | - |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
KINASE-PSP_CK2A1/CSNK2A1 | S51 | 5.5e-14 | 9.9e-3 | 0.43 | 1.8e-9 | 2.1e-6 | 0.045 | 1e-7 | 0.065 | -0.077 | 0.58 | 0.089 |
HALLMARK_G2M_CHECKPOINT | S51 | 2e-7 | 0.24 | -0.28 | -0.68 | 1.6e-5 | 0.79 | 6.8e-4 | 8.3e-5 | 0.34 | 0.068 | 0.04 |
HALLMARK_MITOTIC_SPINDLE | S51 | 1.4e-6 | 0.19 | 0.36 | -0.49 | 5.3e-5 | 0.63 | 2.4e-3 | 3.4e-3 | -0.32 | 9.5e-3 | 0.11 |
HALLMARK_E2F_TARGETS | S51 | 7.0e-6 | 0.076 | -0.012 | -0.83 | 1.2e-4 | 0.82 | 2.5e-3 | 6.7e-4 | 0.14 | 0.082 | 0.15 |
KINASE-PSP_CDK2 | S51 | 2.1e-5 | 0.42 | 0.51 | -0.94 | 4.7e-5 | -0.59 | 0.46 | 1.6e-6 | 0.034 | 0.68 | 0.66 |
KINASE-PSP_CDK2 | T43 | 3.0e-5 | 0.55 | 0.015 | - | 0.59 | 0.98 | 2.1e-4 | 0.019 | 0.25 | - | 0.32 |
HALLMARK_MYC_TARGETS_V2 | S51 | 1.1e-4 | 0.031 | -0.013 | -0.78 | 3.2e-3 | -0.18 | 0.003 | 6.7e-4 | 0.2 | 0.02 | 0.21 |
PERT-PSP_NOCODAZOLE | T43 | 2.2e-4 | 0.67 | 0.15 | - | -0.61 | -0.78 | 1.5e-4 | 0.012 | 0.47 | - | 0.018 |
cibersort: T cell CD8+ | S108 | 2.5e-4 | 2.5e-4 | - | - | - | - | - | - | - | - | - |
STK11 mutation | S51 | 3.2e-4 | - | - | - | - | - | - | 3.2e-4 | - | - | - |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
PPP3CA | S51 | -4.7e-8 | -0.013 | 0.043 | -1.5e-3 | -2.2e-3 | -0.008 | -1.6e-4 | -0.37 | - | -2.5e-3 | 0.51 |
MTM1 | S51 | -1.2e-7 | 0.29 | -0.016 | -0.65 | -5.9e-6 | -0.29 | -0.24 | -9.9e-7 | 0.95 | -0.042 | -0.18 |
PPM1J | S51 | -3.4e-6 | 0.4 | - | - | -0.057 | - | -1.5e-3 | -3.7e-4 | - | -0.05 | -0.11 |
DUSP6 | S51 | -3.6e-6 | -0.024 | - | - | -0.072 | -0.056 | -0.058 | -9.0e-5 | - | 0.14 | -0.05 |
FIG4 | S51 | -3.2e-5 | -0.21 | -0.011 | -0.18 | 0.93 | 0.4 | -0.023 | -0.055 | -0.052 | -0.03 | -0.51 |
PIP4P2 | S51 | -1.1e-4 | -0.19 | -0.24 | -0.39 | -8.1e-5 | 0.57 | -0.022 | 0.27 | -0.25 | -4.2e-3 | -0.75 |
PTPN12 | S51 | -1.2e-4 | -0.36 | 0.13 | -0.048 | -0.22 | -0.17 | -9.2e-6 | -0.41 | -0.58 | -0.034 | -0.84 |
PTPN21 | S108 | -1.8e-4 | -1.8e-4 | - | - | - | - | - | - | - | - | - |
OCRL | S51 | -1.9e-4 | -0.39 | -0.12 | 0.31 | -3.8e-3 | 0.34 | -0.48 | -0.17 | -0.45 | -3.9e-4 | -0.038 |
LPIN3 | S51 | -2.3e-4 | -0.27 | -1.5e-3 | 0.44 | -0.019 | -0.025 | -0.6 | -0.39 | - | -0.026 | 0.52 |