CCT5: chaperonin containing TCP1 subunit 5
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
5uyx chain A
5uyx chain B
5uyx chain C
5uyx chain D
5uyz chain A
5uyz chain B
5uyz chain C
5uyz chain D
6nr8 chain E
6nr8 chain M
6nr9 chain E
6nr9 chain M
6nra chain E
6nra chain M
6nrb chain E
6nrb chain M
6nrc chain E
6nrc chain M
6nrd chain E
6nrd chain M
6qb8 chain E
6qb8 chain e
7lum chain D
7lum chain L
7lup chain D
7lup chain L
7nvl chain E
7nvl chain e
7nvm chain E
7nvm chain e
7nvn chain E
7nvn chain e
7nvo chain E
7nvo chain e
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S26 IKDQDRKS RLMGLEA 7 716 25 - 94 72 - - - - 108 62 83 76 25 25 - - 99 40 5 2 S270 KHKLDVTS VEDYKAL 4 68 6 - - - - - - - - - 10 9 15 12 - - - - 12 4 S346 GRIVPRFS ELTAEKL 7 317 30 - 32 31 - - 71 - - - 44 41 19 16 - - 14 6 13 - S539 DIRKPGES EE_____ 6 349 61 - 53 35 - - - - - - 73 67 14 12 - - 7 3 19 5
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S26 IKDQDRKS RLMGLEA 5.2e-29 - 1.1e-21 - - 8e-15 -0.39 0.081 - 1.2e-11 - S270 KHKLDVTS VEDYKAL - - - - - - - - - - - S346 GRIVPRFS ELTAEKL -2.6e-3 - 0.17 - - - -1.7e-8 - - - - S539 DIRKPGES EE_____ 2.3e-3 - -5.6e-7 - - - 1.2e-20 - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S26
S270
S346
S539
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S26 S270 S346 S539 protein RNA SCNV methylation CCRCC S26 S270 S346 S539 protein RNA SCNV methylation COAD S26 S270 S346 S539 protein RNA SCNV methylation GBM S26 S270 S346 S539 protein RNA SCNV methylation HNSCC S26 S270 S346 S539 protein RNA SCNV methylation LSCC S26 S270 S346 S539 protein RNA SCNV methylation LUAD S26 S270 S346 S539 protein RNA SCNV methylation OV S26 S270 S346 S539 protein RNA SCNV methylation PDAC S26 S270 S346 S539 protein RNA SCNV methylation UCEC S26 S270 S346 S539 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S26
S270
S346
S539
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S26
S270
S346
S539
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.